KEGG   Nicotiana attenuata (coyote tobacco): 109211053
Entry
109211053         CDS       T05870                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2-like
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109211053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nau03041]
    109211053
   03032 DNA replication proteins [BR:nau03032]
    109211053
Spliceosome [BR:nau03041]
 Complex A
  U1 snRNP components
   Sm proteins
    109211053
  U2 snRNP components
    109211053
 Complex B
  U1 snRNP components
    109211053
  U4/U6.U5 tri-snRNP components
    109211053
 Complex C
  U2 snRNP components
    109211053
DNA replication proteins [BR:nau03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     109211053
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 109211053
NCBI-ProteinID: XP_019230099
UniProt: A0A314KLT2
LinkDB
Position
Unknown
AA seq 104 aa
MEEDAPVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENV
REMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq 315 nt   +upstreamnt  +downstreamnt
atggaagaggatgcccctgtgaaaaatgaggaagaggagttcaatactggcccactttct
gtcctgatgatgagtgttaagaataacactcaggtgctcatcaactgtaggaacaacagg
aaacttctcggccgtgtgagggcgttcgatcgtcactgcaacatggtgcttgaaaatgtt
agggaaatgtggactgaggttcccaagactggaaaaggaaaaaagaaggctcaacctgtt
aacaaagataggttcattagcaagatgttccttcggggagattctgtgatcattgtcctc
cgaaatcccaagtag

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