Nicotiana attenuata (coyote tobacco): 109211086
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Entry
109211086 CDS
T05870
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109211086
Transcription machinery [BR:
nau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
109211086
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
109211086
NCBI-ProteinID:
XP_019230135
UniProt:
A0A1J6JHG3
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Position
2:58697050..58702505
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AA seq
518 aa
AA seq
DB search
MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS
KENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAK
DHQIVKRRQRTRKRIVGDEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVASS
QNRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAIL
QVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKYF
QDFANGPKFQDLCQAGVKGLITAVDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVP
FGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHMT
TQEEFINGITDVDGVDGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG
EIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYIF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctctgcttctcgaagtccattgggattgagcacaagg
ttttctgctcatttatgtccgcttaaaaggcctgtagttgtatcatttaaaaaagataaa
acgaaaaaaacaactttagttgcacctaaggaatccatatcgttgcctatagaaacgtct
aaagagaatgaaaagaggtcaagacgagtatctaaacgtactgagagagtgcatgctgtt
tcaattgatattgaagcatctccaagtacgttagaattggactacagtgaagctgctgcc
aaacttgaaagtatctacaagcgcagtctggaaactgatagttccgatacagaagctaag
gatcatcaaatcgtgaagagaaggcaaaggacgaggaagaggattgtaggcgatgaggaa
gcgaagaagggaattgctgataatgtggtcaagaatcgtcgaaagaagtcaaagcggctg
aatcttgaccagaggattgctctgctaaagaataaagaaggtgaattggttgcttcatcc
caaaatagaaaacttaaagaggacaccgaagatgaaaaaattgataagcttgtcagagaa
tattcaggtgctactgacttagcgagcttagactggaagaaaatgaagatccctccagtg
cttccatcttctgagcatgcgtggctcttcaagttgatgcaacctatgaaggcaatcctt
caagttaaggagaacttgcaaaatgatttggggcgagaaccaactgacgctgaagtagct
gaggcaacaaatatcgatgcctctgaactacggaaaaatctggaagttggtcgagctgct
agaaataagctgattaagcacaatctacgtcttgttttgttcgtgataaacaaatatttt
caagattttgctaatgggccaaaattccaagacctctgtcaggcaggcgtcaagggacta
attacagctgttgatcgatttgaacctaataggaaatttagactgtcaacatatggtctt
ttttggataaggcatgccataatacgttctatgacaacctcaagcttcaccaaagtccca
ttcgggcttgaatctatcagagtggaaattcagaaggccaaattgcagctgctatttgag
cttcagaggatgccaacagatgaagagataattgaaagagttagactttcccctgagaga
taccatgaagtgatgaaagtatcaaaacctgtcttctctctccatgcaagacacatgacg
acccaagaagagtttattaatggaataactgatgtagatggcgttgatggggataagagg
aggcaaccagctctactcaggcttgctcttgatgatgtgcttgattctcttaagcccaag
gagagtctagtaatcagacaaagatatggacttgatggcaaaggtgatagaacattggga
gaaattgcgggtaacctaaatatttcgagagagatggtacggaagcatgaagtgaaggct
ctcatgaagctcaagcatccaactcgagtagattatcttcgccagtacatattctaa
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