Nicotiana attenuata (coyote tobacco): 109211316
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Entry
109211316 CDS
T05870
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109211316
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109211316
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109211316
NCBI-ProteinID:
XP_019230392
UniProt:
A0A314KJU2
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MGTLKNRLIFFVLVTLVLSIEANISEFDEVWQTRATQAKKTAQDSYNTHPETVADNLNKH
VHKSDEGSNSTRRDLHKYNGPCMSTNPIDRCWRCDPNWAKNRMKLADCVLGFGHHTTGGK
GGKIYVVTDPSDDDMVNPKPGTLRHAVIQPEPLWIIFKHHMVIRLNQELIMTSNKTIDSR
GQQVHIAFGASFMLQFINNVIIHGLHIHDIKAGNGGLIRDSINHYGFRSRSDGDGISIFG
STNIWIDHVSMSNCDDGLIDAVQASTAITISNCHFTNHNDVMLFGASDSYSEDSILQITL
AFNHFGQGLIQRMPRVRWGFVHAVNNDYTHWLMYAIGGSQHPTILSQGNRFIAPPNPNAK
EVTKREYSPESVWKNWVWRSQGDLMMNGAFFVESGNPNHIFMKGPDMIHPRPGSYASRLT
RFSGSLNCIEGKPC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggaactctcaaaaataggttgattttctttgttttagtcactctagttttaagcata
gaggccaatattagtgagtttgatgaggtgtggcagactcgagctacgcaagcaaagaaa
actgctcaggattcctataatactcatcctgaaaccgtcgcagacaatctcaacaaacat
gttcacaagtcggatgaaggtagcaatagcacaaggagagacttgcacaagtacaatggt
ccatgcatgtctactaaccctattgatcgttgttggagatgtgacccaaactgggctaaa
aaccgcatgaagctagctgattgtgttctcggattcggccaccatacaactggtggcaaa
ggtggcaaaatctacgtagtaactgacccttcagacgacgatatggtgaatcctaaacca
ggaacactgcgccatgcagtcattcaaccagagccactttggatcatatttaaacatcac
atggtcattaggcttaaccaggaacttatcatgacaagcaacaagacaattgattccaga
gggcaacaagtacacattgcctttggtgctagtttcatgttacagttcattaacaatgtg
attattcatggtcttcatatccatgatattaaggctggtaatggtggcctaatcagagac
tcgatcaatcattatggttttcgatcaagaagtgatggtgatggtatttcaatctttgga
tccacaaatatttggattgatcatgtttccatgtctaattgtgatgatggactcattgat
gctgtccaggcttcaactgctattaccatttccaactgccatttcactaaccataatgat
gttatgttgtttggagcaagtgatagctactcagaggactcaattttacagataacactt
gcttttaatcactttggacaaggattgatccagaggatgccaagagtgagatggggattt
gttcatgcagtcaacaatgattacactcactggctaatgtatgcaattggtggaagccaa
caccctaccatcctcagccagggcaaccggttcatcgccccgcctaaccctaatgcaaag
gaggtgaccaaaagggagtattcacctgaaagtgtgtggaagaattgggtgtggagatca
cagggagatctgatgatgaacggagcgttctttgtggaatctggaaatcccaatcatata
ttcatgaagggtcctgatatgatccaccctaggccaggatcatatgcaagcaggctaaca
agattttcaggctctttgaactgcattgaagggaagccttgttag
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