Nicotiana attenuata (coyote tobacco): 109211722
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Entry
109211722 CDS
T05870
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109211722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109211722
03036 Chromosome and associated proteins [BR:
nau03036
]
109211722
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109211722
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109211722
Chromatin remodeling factors
BAF complex
109211722
PBAF complex
109211722
GBAF(ncBAF) complex
109211722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
Bromodomain
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
109211722
NCBI-ProteinID:
XP_019230835
UniProt:
A0A314KII6
LinkDB
All DBs
Position
Unknown
AA seq
2239 aa
AA seq
DB search
MQSGGGAQQGGGVAGHGRSTAASASASPSSSSSASHMGLDQQQQQQQQQQLHQHQQQQQR
QSLQQQFLRRPEGNEAILAFQTGNAHGMLGGGNFVGPSGSMQLPQQSRRYIDLGQQHGSP
TIREDGQNRSQGFEQQMLNPVQQAYLQYAYQAAQQKSALGMQHQQQMKMGMFGPPAKDQD
PRIANMKELVAMQASNQAQASSSKISSEHFSRGEKQSDQGQQLMADQRSDPKLPSQPTLL
GQAVATKPMQAPPSQQSMANMTSNSLAMAAQMQAMQALALERNVDLSLPANANIMAQLIP
LMQSRMMMAQQKVPDGNVPVQSSSGHTPKQQVSSPQIANENSPHAHSSSDVSGSSSAKTR
QTVTTGPLGVTHNIASINNSNNIVQQQFSAQGRENNLPSRQPIMASSGLPPMQYPQLSIN
PNQGVDNTLPPKPTSTAQETLQTQYGRQLSRPSPHSAACSPDGNLGNSLESQGGNVRQVQ
KQHLGFSKQQLHVLKAQILAFRRLKKGDGTLPRELLQAIIPPPLDVQTQQTFPPSGTANQ
EKSSGKSSEDNSRRPEPSEKGPQLVVPSSDGPNGSKEEVIGDESTAASTIVVPHSATETK
ETASVVLPGKEEKPIMGHASKSDQDAEHAIQNTPSRGDIAPDRGKSVASQATGSDATQAK
KPMQSSVTQQKDTGPARKYHGPLFDFPVFTRKHDAFGPSMMMNNNNNLTLAYEIKDLLVE
EGSEILKRKREESIKKIGDILAVNLERKRIRPDLVLRLQIEEKKLRLADIQARLRDEIEQ
QQQEIMAMPDRPYRKFVRLCERQRQDLARQVQASQRAIREKQLKSIFQWRKKLLEAHWAI
RDARTARNRGVAKYHERMLREFSKKKDDNRNERMEALKNNDVERYREMLLEQQTNIPGDA
SERYAVLSSFLSQTEEYLHKLGSKITATKNQQEVEESANAAAAAARAQGLSEEEVRAAAA
CAREEVMIRNRFSEMNAPRDGSSVNKYYHLAHAVNERVIRQPSMLRAGTLRDYQLVGLQW
MLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKQNYGPHLIIVPNAVLVNWKSEFLN
WLPSASCIFYVGGKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEA
QRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFS
KPFQKEGPTHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSVVLRCR
MSAFQSAVYDWIKSTGSLRVDPEDEERRAEKNPNYQPKTYKVLNNRCMELRKACNHPLLN
YPYLNVTKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYR
RIDGTTSLEDRESAIVDFNSPDTDCFIFLLSIRAAGRGLNLQTADTVIIYDPDPNPKNEE
QAVARAHRIGQKREVKVIYMEAVVDKIASHQKEDEFRVGGIVDSDDDLAGKDRYMGSIES
LIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETLHDVPSLQEVN
RMIARSEEEVEQFDQMDEEFDWEEEMTRYDQVPKWLRATSKEVNGAIANLAKKPSKNVLF
SSGTGMDSSGAPESEKKRGRPKSKKVPIYTELDDDFSEASSEERNGYSAHEEGEIGEFED
DEFSGAVGVTPVNKDQSEEDGPSYADRYEYHQGPQGAKTLVPDQVGSSGSSSDSQKPIQI
VSSSVSSQQKFGSLSALDARPGSRAKRMADELEEGEIAVSGDSHVDLQQSGSWIQDRDEG
EEEQVLQPKIKRKRSLRVRPRHAAERPEETLIEKPAVQRGDSSQMALQGDRRYDLQVRND
RGHKAPAEPSALKHGQGDASLKSKRSIPTRKSSNSVKMHGSGKPGKVSCLSPDDSFEPAR
ESWDNKPSGTYSGGTKMSEVIQRKCKTVTIKLQKKIEKGGHQIIPLLHGLWNRIESSGCI
GGADDSPFGLQTIDMRVDESEYSGVLEFVSDVQLMLKRAVQYFGFSHEVRSEARKVHDLF
FDILKIEFPETDFREARNSISFAGPAASTTPGASSRQMPVGQNKRHKLINEMEPDPSPLQ
KPKTRGALHAGEDAKAKNHMAQRETRFGGSSGRELSQQDDSRPFTHPGELVICKKKRKDR
EKLGMKPGSSSAGPVSPPSVPRSIRSPGSLPTVKEGGRLNQQTPPQNQLNGSGSSSSVGW
ANPVKRLRSDSARRRQSHL
NT seq
6720 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagggggtggagctcagcaaggtggtggtgtcgccggccatgggcggagcacg
gcggcatcagcctcagcttctccttcatcatcttcttctgcctctcatatggggttggat
cagcagcagcagcagcagcagcagcagcagctgcatcaacatcaacagcagcaacaacgc
cagtcattgcaacaacagttccttagaaggcctgaaggaaatgaagctattcttgccttc
cagactggcaatgcccatggaatgttaggtgggggtaattttgttggaccttctggatcc
atgcagctgcctcaacagtcgaggaggtatattgatttgggccaacaacatggttctccc
accattcgagaagatggccagaacaggagccagggctttgagcaacagatgttgaatcct
gttcaacaggcatacttgcagtatgcttaccaggcagcccaacaaaagtcagctcttggg
atgcaacatcagcagcaaatgaaaatgggaatgtttggccctcctgcaaaggaccaagat
cctagaattgctaatatgaaagaacttgttgccatgcaggcatcaaaccaggcccaggca
tcatcatcaaagatatcctcagaacatttctctcgtggtgagaaacaatctgatcagggc
cagcagttgatggccgatcagagatcagatccaaagcttccttcccagccaacattgctt
ggccaagcagtagctacgaagcccatgcaggctccaccatctcagcaaagcatggcgaac
atgacaagtaactctcttgctatggctgcgcagatgcaagcaatgcaggctctggcactt
gaacgtaatgttgatctgtcactacctgcaaatgcgaacattatggcacagctaattccg
ctcatgcagtccagaatgatgatggcccagcagaaagtgcctgatggcaatgtgcctgtt
caatcttcatcaggtcatacgccaaagcagcaagtttcatcacctcaaattgcaaacgaa
aactcgccccatgctcattcttcaagtgatgtgtcgggctcaagttctgctaaaactagg
cagactgttacaactggtcctctcggtgtgacacataacatcgcttcaattaataactca
aataatatagtccagcagcagttttctgctcaaggcagagagaacaatttgccttctaga
caaccaattatggctagcagtggattgcctcccatgcaatacccacagttatctataaac
ccgaaccagggtgtggataacaccttgccacctaaacctacctcaactgcccaagaaacc
ttgcagacgcagtatggcaggcaattgagtcgaccttcaccacattctgcagcttgttct
ccagatgggaatttggggaattcccttgaatctcagggcggaaatgtccgtcaggtgcaa
aaacaacatctggggttcagtaagcagcaactgcatgttcttaaagcccagatacttgca
tttagacgtctaaagaaaggagatgggacattaccgcgtgagttactccaagctattatt
ccgccacctctagacgtgcaaacgcagcaaacgtttcctcctagtggtacagcgaatcag
gagaagtcatcgggaaaaagctcagaagataactcaagacgcccggaaccaagtgagaag
ggtccccagcttgtagtaccatcatctgatggaccgaatggttcaaaggaggaggtcata
ggagatgagagtacagctgcctcaaccatagttgtgccacatagtgcaactgagacaaag
gagactgcatcagtggttcttcctggaaaagaagagaagccaatcatgggacatgctagt
aaatctgaccaggatgctgaacatgctattcagaatactcctagtagaggtgatattgca
ccggataggggtaaatctgttgcatcacaagctactggttctgatgcaactcaggcaaaa
aaacctatgcagtctagtgtcactcaacaaaaagatacaggtccagctcgcaagtatcat
ggaccattattcgattttcctgtcttcactcgaaagcatgatgcttttggaccatccatg
atgatgaacaacaataataatttaacattggcttatgaaatcaaggatcttctagtggag
gaaggctcagaaatcctcaagagaaaaagggaggaaagtataaagaagattggtgatatc
ctagctgttaatttagagaggaaaaggattagaccagatcttgttctaagattacaaata
gaagaaaagaaactccgacttgctgatatacaggcacgcttgagggatgagatcgagcaa
cagcagcaggaaataatggcaatgcctgataggccataccgaaaatttgtaaggctatgc
gaacgtcagcgtcaggaccttgctaggcaagtgcaggcctcccagagagctatccgagaa
aaacaattaaaatctatttttcaatggcgtaagaagcttcttgaggctcattgggcaata
cgtgatgctcgaactgcacgcaataggggagtggctaagtaccatgagagaatgttgagg
gagttctcaaagaaaaaggatgataatcggaatgaaagaatggaggcattgaagaataat
gatgttgagagatacagggagatgttgctagagcagcagaccaacattcccggtgatgct
tcagagagatatgctgttctctcatcatttttgagtcagacagaagagtatcttcataaa
ttgggaagtaaaattacagcgacaaaaaatcaacaggaggttgaggagtctgcaaatgct
gctgcagctgctgcacgagcacagggcctctctgaagaagaagtaagagctgcggcagcc
tgtgctcgggaggaagtcatgataaggaatcgtttctctgaaatgaatgcacccagagat
ggttcatcagttaacaagtattaccatcttgcccatgctgtgaatgaaagggttataagg
cagccttctatgttaagagctggaactttgcgagactatcagttggtggggttgcagtgg
atgctttctttgtataataataagctaaatggtattttggctgatgagatgggtctgggg
aagactgtgcaggttatggcattaattgcttacttgatggaattcaaacaaaactatgga
ccacatcttataattgtgccaaatgcagttctagttaattggaagagtgagtttctcaat
tggcttccatctgcgtcctgcatcttctatgttggtgggaaggatcaaagatccaagtta
ttttcacaggaagtttgtgcgatgaaatttaatgttctcgtgactacgtacgagttcatc
atgtatgatcgttctaaactttcaaaagtcgattggaagtatataataattgatgaagca
caacgtatgaaggacagagaatcagttcttgctcgtgatcttgacagatatcgatgccaa
aggcgcttgcttctcacggggacaccattgcagaatgatttgaaggaactatggtcactt
ctaaatctactacttccagaagtatttgataatcgcaaagcatttcatgattggttctcc
aagccctttcaaaaagaaggtccgacacacaatgctgaggatgactggcttgagactgag
aagaaggtcattattatccatcgacttcaccaaattctcgagcctttcatgctcaggcgt
cgtgttgaagatgttgaaggttcacttccacccaaggtctcagttgtcttaagatgcagg
atgtcagcttttcagagtgctgtttacgactggatcaagtctactggttcacttagagtt
gaccctgaagatgaggagcgaagggctgaaaaaaatccaaattaccagcctaaaacatat
aaagttttaaataatagatgtatggagcttcgaaaagcttgcaaccatcctttgcttaac
tatccatatctcaatgttacaaaggactttcttgttaaatcatgtggaaaattgtggatt
cttgatcggatcttaattaaacttcaaaggacagggcacagggtgttgcttttcagtacc
atgacaaagctgcttgatatcttggaggagtatttgcagtggcgacgactcgtctacaga
agaattgacgggacaacgagcttagaggatcgtgaatcagctattgtggattttaatagt
ccagatactgattgctttatcttcttgctaagcattcgtgctgctgggcgtggattgaat
cttcagactgctgacactgttattatctatgatcctgatccaaaccccaaaaatgaggaa
caggcagttgctagagcccatcgtatagggcagaaaagagaagtgaaagtcatatacatg
gaggcagttgttgacaaaattgcaagtcatcagaaagaggatgaattccgtgttggaggc
atagttgattctgatgatgacctcgcgggcaaggaccggtatatgggatctattgagagt
ctcattcggaataatattcaacagtataagattgacatggctgatgaagttataaatgct
gggcgttttgaccaaaggactacacatgaagagcggcgtttgactttagaaacgttatta
catgacgaagagagatatcaagagacacttcatgatgttccctctcttcaggaggtaaat
cgcatgattgctaggagtgaagaagaggtagaacaatttgatcaaatggatgaagaattt
gattgggaagaggagatgactagatatgaccaggttccaaagtggcttcgtgctaccagt
aaggaagttaatggggccattgccaatttagcaaaaaagccctcaaagaatgtcttattt
agtagtggtactggcatggactccagtggagctcctgaatctgagaagaaaagggggcgg
cccaaaagtaagaaggttcctatttacacagaattggacgatgacttctctgaagcaagc
tctgaggagaggaacggatattcagcccatgaagaaggagaaattggggaattcgaagat
gatgaatttagtggtgctgttggcgttacaccagttaacaaagaccaatcagaagaagat
ggtccaagttatgctgatagatatgaataccaccaaggtccacaaggtgcaaagactctt
gtacctgatcaagtgggttcatcaggatcatcttcagacagccaaaaaccgatacaaata
gtatcctcgtctgtgtcatctcagcagaagtttggatccctttcagcattagatgccagg
cctggttctcgggccaaacggatggcagatgaattagaggaaggagaaattgcagtatct
ggagactcacatgtggatctccagcagtctggtagttggatccaagatcgtgatgaaggc
gaagaagaacaggtgttgcagcccaaaataaaaaggaaacgcagtttgagggttcgacca
aggcatgctgcagaaaggccagaagagacgctcattgagaagccagctgtgcagcgtgga
gattcttctcagatggcacttcaaggggatcgtagatatgatcttcaagtgagaaacgat
cgtggacacaaagcgcctgcagagcctagtgctttaaagcatggtcaaggtgatgcatcc
ttgaagagtaagcgaagcatacccacgaggaaatcttctaattcagtgaagatgcatggt
tcaggaaaacctggaaaagtcagttgcttgtctcctgatgattcctttgaacccgcaaga
gaaagttgggataataagcccagcgggacttatagtggagggactaagatgtctgaggtc
attcaaagaaagtgcaagactgtcactatcaagctccaaaagaaaatagagaagggaggc
catcaaataattccactgctacatggtctgtggaacagaattgaaagttctggttgcata
ggtggggctgacgatagtccatttggtttacagacaattgatatgcgtgttgatgagtct
gagtacagtggagtgctcgaatttgtgtctgatgtgcagctgatgttaaaacgtgcagtg
caatactttgggttctcacatgaggtgagatctgaagcaaggaaagtgcatgatcttttc
tttgacatcttgaagatagaatttccagagactgacttccgagaagcaaggaattctatt
tcttttgctggacctgcagctagtactacacccggcgcatcttcaaggcagatgcctgta
ggtcagaacaagagacataaactgataaatgaaatggaacctgaccctagtccactacag
aaaccaaagacacgtggagcactccatgccggtgaagatgccaaggctaagaatcatatg
gctcaaagagaaacaagatttggtggtagcagcggccgagagcttagccaacaggatgat
tcacggccgttcactcatcccggggagcttgttatttgcaagaagaagagaaaagataga
gagaagttgggtatgaaacctgggagtagttctgctggtcctgtctcaccacctagtgtc
ccccgcagtatcagaagtccaggctcactcccaactgtgaaggaggggggaaggttaaac
cagcagacaccaccccaaaatcagttgaatggcagtggtagcagcagctctgttggctgg
gcaaaccctgtgaagagactaagatcagattctgcaagaaggcggcaaagtcatttatga
DBGET
integrated database retrieval system
