Nicotiana attenuata (coyote tobacco): 109211752
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Entry
109211752 CDS
T05870
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109211752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109211752
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109211752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
109211752
NCBI-ProteinID:
XP_019230870
UniProt:
A0A314KIG5
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MASLISQNASRTIGVEKSKRKAKKEVSEKESNRKRKKEQNEENDELEVEQEKEMKKLENL
LFGSLYNPVGFGKDDEEEKRNDGEDDSAMFFVDRFADSALSVYEGDAQLVPEGIHVVGKE
ERKPVWVDDEEEKTNIKIASVNRLRKLRKEEGEDVISGSTYVARLRAQHAKLNPGTEWAQ
IDSQGRSYSSDDEDSDEESKHTEGYGSKNVKLVGDILQSNEDLVVKSRTKLLPGLLEYSR
LVDANAADPSNAPINSVQFHRNSQLLLVGGLDKKLRFFQIDGKRNTKIQSIFLEDFPIKK
ASFLPNGSQVIISGRRKFFHVLDLVKASVDKIGPLVGREEKSLESFEVSPDSDTIAFLGN
EGYILLVSSKTKELIGTLKMNGTVRSVAFTNDGQQLLTSGGDGQIYHWDLRTRTCIHKGV
DEGSINGTALCTSPNGSLFAAGSDSGIVNIYKREEFLGGKRKPIKAIENLTTKVDFMKFN
HDAQILAISSSMKKNSSKLIHIPSFTVFSNWPSPNRAVHYPRCLDFSPHGGFMAMGNAEG
KVLLYKLHHYHDA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttgatatcgcagaatgcttctcgtacaatcggggttgaaaagtctaaaagg
aaggctaagaaggaagtaagtgagaaagaaagtaataggaagagaaagaaagagcagaat
gaagagaatgatgaattagaagtcgagcaggagaaggaaatgaagaagcttgagaactta
ttgtttggctccttgtacaaccctgttgggtttgggaaggacgatgaagaagaaaagaga
aacgatggcgaagacgattctgctatgttctttgtggaccggtttgcggatagtgcgttg
tctgtttatgagggggatgcacagctggtgccagaaggtatccacgttgtgggaaaggag
gagcggaaacctgtgtgggtagatgatgaagaagagaagactaatatcaaaatagcaagt
gtgaacagattgaggaagctgaggaaagaagagggtgaggatgtcatatctggttccacg
tacgtggcgagactaagggcccaacacgctaaacttaatccaggcactgaatgggcccaa
attgattctcaaggcagaagctacagttctgatgatgaagattctgatgaggaaagtaaa
catactgagggctacggttcaaagaatgtcaagttggtcggtgatattcttcaatcaaac
gaagatcttgttgtcaaaagtcgcaccaagttgttacctgggcttcttgaatattcgaga
ctggttgatgcaaatgcagctgatccttcgaatgcaccaataaattctgttcagttccac
aggaattctcagttgctccttgttggtggattggacaaaaaactcagattttttcagatt
gacgggaaacgaaatacaaagatacagagcatctttcttgaggattttcctattaaaaag
gcatctttcttacccaatggatctcaagttattatatcaggaagaagaaagttcttccat
gtcttagacttggtcaaagcaagtgtagataaaataggtcccctagttggcagggaagaa
aagagcctggaaagttttgaggtgtctcctgattcagatacaattgcttttcttggtaat
gaaggatacattttgctagtttcctccaaaacaaaggagctaattgggacactgaaaatg
aatggaactgttcgctcagtggctttcaccaatgacggacaacaattattgacctctggt
ggagacgggcagatttaccattgggatttgaggacaagaacttgcattcataaaggtgtt
gatgaagggtccataaacggtacggctctttgcacttcaccaaatggtagtttgtttgct
gctggttcagacagcgggatagtaaatatttataaaagagaagagtttttggggggaaag
agaaaaccaatcaaggcaattgagaatctcaccacgaaagtggattttatgaaatttaat
catgatgctcaaatattagccatcagttctagcatgaagaaaaacagctcaaagctaatt
cacattccatcatttacagttttttcaaactggccttctccaaatcgagctgtgcactat
ccacgctgtttggattttagtccgcatggaggattcatggctatgggaaatgctgaagga
aaagtgttactgtacaagttgcatcactaccatgatgcatag
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