Nicotiana attenuata (coyote tobacco): 109211772
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Entry
109211772 CDS
T05870
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109211772
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109211772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
HEAT_EZ
HEAT_2
TPR_Trm732_C
UTP20
Motif
Other DBs
NCBI-GeneID:
109211772
NCBI-ProteinID:
XP_019230889
LinkDB
All DBs
Position
Unknown
AA seq
2051 aa
AA seq
DB search
MAQQQSSRLNRLLTLLDTGSTQATRLTAARQIGEIAKSHPQDLNSLLSKVSQYLRSKKWD
TRVAAAHAIGSIAENVKNTSLAEVCSSVEVKMSEAGISGNVAELVAWPKCYPKIGGTSFR
SFDLNKVLEFGALLASAGQEYDIPMDNSKNSRERLARQKQNLRRRLGLDVCEQFMDVNEM
IRDEDLMVQRANSPGNGVATQYYSSRPVGNIRHFVAKMVPSVRSRRPSARELNLLKRKAK
ISSKDQTKGWNKDGETEAPQSQDIISPRGMCPDISSSNKLLGENISDEDGLESDGDKIWP
FQSFVEQLILDMFDPLWEVRHGSVMAMREILTHQGANAGVIIPDLRCDSALNIKMEDRVD
ENTIKRERPIDLNMQVPPDELESVSKKLKVEPEGASYLAMDTMVCTSRDGDPGGVNVKAE
DSGLSLAVEQANGEFSIGSVKLETQSHLSGGGSLANDMSAEKEGGVDKASFEKMDILENL
PENCELMNLVKLARHSWLKNCEFLQDCAIRFLCVLSLDRFGDYVSDQVVAPVRETCAQAL
GAVLKYMHPTLVHETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLPELLGCVLPAC
KAGLEDPDDDVRAVAADALIPTAASVVSLNGQLLHSIIMLLWDILLDLDDLSPSTSSVMN
LLAEIYSQEQMIPKTFGEKKKFDLNEIDRQDDPGEGTWSSENPYMLSTLAPRLWPFMRHS
ITSVRYSAIRTLERLLEAEYKRSIAESSSSFWPSFILGDTLRIVFQNLLLESNEEIVQCS
GRVWRILLQCPVEDLEDASKAYFPSWLELATTPYGSSLDTVKMFWPVALPRKSHFKAAAK
MRAVKPENDSLQSICSDSGEGTTVLEKSTEASASSGKIVVGADVDMSVTYTRVVTATVLG
ILAARLRERSLQFFIDPLWKALTSLSGVQRQVASMVLISWFKELKTRNIMDMNGVIAGIS
SNFRSQLMDLLACINPAFPTKDSLFPYIELSRTYDKMRNEARQLYHETEAAGMFKDLLSS
IQVDLENLSADDAINFASKLQFLSINSMGEESAELNSLDELETFKQRLLTTSGYLKCVQN
NLHITVSSLLAAAVVWMNELPVKLNPIILPLMASIKREQEEILQSKAAEALAELIYCCMG
RKPGPNDKLIKNLCSLTCMDPCETPQAGVLNSIEIIEEQDLLSSVSSSNRHKSKVHMLSP
GEDRLKVEGFISRRGSELALKYLCEKLGGSLFEKLPKLWDCLVEVLKPCSLEGMTEEDEK
LITRTIELVKDYQNLINNIQVVRSIAPMLDETLRPKLLTLLPCIFRCVRHSHIAVRLAAS
RCITTMAKSMTLDVMGSVIQNVVPMLGDITSVHSKQGAGMLVSLLVQGLGIELVPYAPLL
VVPLLRCMSDSDHSVRQSVTHSFATLVPLLPLARGVSPPVGLSEHLSRSQEDVKFLEQLV
DNSHIDDYKLSTDLKVTLRRYQQEGINWLAFLKRFNLHGILCDDMGLGKTLQASAIVASD
VAEHIALNSSQDLPPSLIICPSTLVGHWVYEIEKFIDGSLLTTLQYVGSAQERISLRSQF
SEHNVIVTSYDVIRKDVDYLRQLFWNYCILDEGHIIKNSKSKITVAVKHLKAQHRLILSG
TPIQNNVLDLWSLFDFLMPGFLGTERQFHASYGKPLLAARDPKCSAKDAEAGVLAMEALH
KQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSHVRQEISSIVKHNES
DSNQKNDLPKASSHVFQAIQYLLKLCSHPLLVFGERVAESLSSVVSELFPPGSDIVSELH
QLHHSPKLVALQEILSECGIGVDSGSEGTICVGQHRVLIFAQHKALLDIIERDLFHTHMK
SVAYLRLDGSVEPEKRFDIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNP
MRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASLKTMN
TDQLLDLFTSAESKKGASRSRRTDEKSDVDSILPRSGKGLKAILGGLEELWDQSQYTEEY
NLSQFLAKLNG
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagcaatcatcacggctaaatcgcctgctcactttattagacactggctcg
acccaagcaacaagattgacagctgctaggcagattggtgaaatagccaaatcacatcct
caggacctgaactctttgttgagtaaggtttcgcaatatcttaggagtaaaaagtgggac
accagagttgctgctgctcatgccattggatcaattgctgaaaatgttaaaaatacatct
ctggctgaagtatgttcatctgtagaggtgaaaatgtctgaagcagggatctcaggcaat
gttgcagaattggtagcttggcctaaatgttatcctaaaataggagggacctcatttaga
agttttgacttgaacaaagtactggagtttggggctctattggcgtctgcaggacaggag
tatgatattcccatggacaatagcaagaattcaagggagcgattggcccgccagaaacaa
aacctgcggcgtcgattgggattagatgtgtgtgagcagttcatggatgtcaatgaaatg
ataagggatgaggacctgatggtgcagagagctaattctccaggaaatggtgttgctact
caatattattcatcaaggcctgtcggcaatatccggcattttgttgcaaaaatggtacca
agtgtcagatctcggaggcccagtgcaagggaactaaatttgctgaagcggaaagcaaaa
ataagttcaaaggaccaaacaaaaggatggaacaaggatggagaaacagaagctccacaa
tcacaagatataatatctcctaggggcatgtgtcccgatatatcgagctctaataagcta
cttggtgaaaacatctctgatgaagatggattagagagtgatggagataagatttggcca
tttcagagttttgttgagcaactcatccttgatatgtttgatcctttatgggaggttcgt
catggcagtgtcatggctatgagagagatcttaacccatcaaggtgctaatgcaggagtt
atcattccagacttgagatgtgatagtgcattaaatattaaaatggaagatagggtagac
gagaatactatcaaaagggagagaccaattgatctgaatatgcaagttccacctgatgag
ttagagtcagtttcaaagaaactgaaggttgaacctgaaggtgcatcttatttggcgatg
gatacaatggtctgtaccagcagggatggtgatcctggtggtgttaatgtgaaagcggaa
gattctggattgagtttggctgttgaacaggctaatggtgaatttagcattggttctgtt
aagttggagactcaatctcacctcagtggtggtggaagcctggctaatgatatgtcagcg
gagaaggaaggtggcgtggataaggcttcgttcgaaaagatggatattctagaaaacctt
cctgagaattgtgagctgatgaacttggttaaattggctaggcattcttggcttaagaat
tgtgaatttcttcaagattgtgctattcgtttcttgtgtgtcttatcattggatcgtttt
ggagactatgtgtcggatcaagttgtggctcctgttcgtgagacttgtgcacaagcttta
ggcgctgtgctgaagtacatgcatcctactctagttcacgagacactgaatatcttgctg
cagatgcagcgtagaccggaatgggagattcgtcacgggagtcttttggggatcaagtat
ctagttgccgtgcggcaggagatgcttccagagttgcttggctgtgttctcccggcatgc
aaagctgggcttgaagatcctgatgatgatgtgagagctgttgcggcagatgctttaata
cctactgcagcgtctgttgtttctttaaacggccagctgttgcattcaataatcatgctg
ctctgggatattttgcttgacttggatgacctcagtccatctacgagcagtgtgatgaat
ctgttggcagagatctactctcaagagcaaatgattccaaaaacgtttggggagaaaaag
aaatttgatctcaatgaaattgatcgacaagatgaccctggggaagggacatggtcttca
gaaaatccttacatgttatcaacattggcgccaagattatggcctttcatgagacatagt
atcacttcagtccgttattcagctattcggactttggaacgattgcttgaagccgaatat
aagaggagcattgctgaatcatctagctctttctggccttcatttattttgggtgatact
ctcaggattgttttccaaaatttgctgcttgaatcgaatgaggagatcgtgcagtgttca
ggcagggtttggaggatccttctccagtgcccagtagaagacttggaagatgcttcaaag
gcatattttccttcttggttggagttagcaactactccatatggttcatcattggatact
gtaaaaatgttttggcctgtagctcttccccgcaaaagccacttcaaagcagctgcaaag
atgagagctgtgaaaccagaaaacgattcccttcagagcatatgctcagattcaggtgaa
ggcactactgtgctggagaaaagtacagaggcttccgccagcagtggaaagatagtggtt
ggtgctgatgttgacatgtcggttacgtatacacgtgtcgttactgccacagtcttgggc
attttagctgctaggttacgtgaacgttctttgcagttttttattgaccccttatggaag
gcgcttacctctctatctggagttcaacgccaggtagcttcaatggtgcttatttcttgg
tttaaagaactgaaaaccaggaacatcatggatatgaacggggttattgctggcatctca
agtaattttaggagccaattgatggatttgctagcctgcattaaccctgcttttccgacg
aaagattctctttttccttatattgaactctcaagaacgtatgataaaatgcgcaatgaa
gctcgtcagctctaccatgagaccgaggcagctggcatgtttaaagatttgttgtcatcc
attcaggttgacctagaaaatcttagcgccgatgatgcaataaattttgcatctaaactt
caattcttaagtattaattctatgggggaggaatctgccgagctgaacagcttggacgaa
ttagaaacattcaaacagaggcttttaaccacttctgggtatttgaaatgcgtccagaat
aatttgcatattaccgtctcttctttactggccgctgctgttgtctggatgaatgaactt
ccagtgaaactgaatccaattattttacctttgatggcttctattaagagagaacaggag
gagatattacaaagtaaggcggctgaggctcttgcagaacttatatattgttgtatggga
cggaagcctggaccaaatgacaagttaattaagaacctctgtagtttgacatgcatggat
ccttgtgagacacctcaagccggagttttgaattctatcgaaataattgaagagcaagat
cttctatcctcagttagtagcagtaatagacacaaatcgaaagttcatatgctctcccct
ggtgaagatcgtttaaaggttgagggcttcatcagtagacgtggatctgaacttgccttg
aagtacttatgtgaaaaattgggtggatctttgtttgaaaagcttcctaagctgtgggac
tgcttagttgaagttcttaagccttgtagtcttgaaggcatgactgaagaagatgaaaaa
cttattactcgaactattgagttggttaaggattatcagaacttgattaacaatatccag
gtggtccgttccattgcaccgatgctggacgagacgttaagaccaaaacttctcactctt
cttccgtgcatcttcagatgtgttcgtcattcacatattgctgtgagattagctgcatct
agatgtattacaaccatggccaagtcaatgacattggatgtgatgggttctgtaattcag
aatgttgtgcctatgttaggtgacattacatctgtacattctaaacaaggagctggcatg
cttgtcagtttgcttgtccaaggactcggtatcgagctggttccttatgctcccctttta
gtagttcccctcctgaggtgtatgagcgattcagatcattctgtcagacagagtgtgaca
catagttttgccacccttgtgcctctacttccattagcacgtggtgtttctcctcctgtt
ggtcttagcgaacacctatcacgaagtcaagaagatgttaaatttttggagcagctagtt
gacaactctcacattgatgattacaagctctcaactgacctaaaggtgacattgagaagg
taccaacaagaaggtataaactggttggcatttttgaagcgctttaatcttcacgggatt
ttatgtgatgacatgggccttggtaaaacccttcaagcatcagcaattgtggcttctgat
gtagcagagcacattgctctaaatagttcccaggatctacctccatccttgataatatgc
ccctcaacccttgtcggccactgggtttatgaaatagagaagtttattgatggttctttg
cttactaccctccagtatgttggttctgcacaagagcgcatttcgctacggtctcagttt
agtgagcataatgttatcgtgacatcatatgatgttatccgcaaagatgttgattatctt
agacagctgttttggaactattgcattctagatgagggacatatcataaagaattctaag
tcgaaaataacagttgctgttaaacacttgaaggcacaacaccgactcattctgagtgga
acaccgatacagaataatgtgttggatctgtggtcactttttgacttccttatgccaggg
tttcttggaactgaaagacaatttcatgcctcctatggtaaaccgctactagctgccaga
gatcccaaatgttcagcgaaagatgctgaagcaggtgtgcttgctatggaagcattgcac
aagcaggtgatgccttttctccttcgccggactaaagatgaagtcttatctgatctgcca
gagaaaattattcaggataggtactgtgacctgagtcctgttcagctaaaactctacgaa
caattttctggttcacatgtgagacaagaaatttccagcattgtgaagcacaatgaatca
gattcaaaccaaaagaatgatttgccaaaagcatcttctcatgtattccaggcaattcag
tacttgcttaaactttgtagtcatcctttgctcgtgtttggggagagagttgcagaatca
ctctcatctgttgtgtcagagctcttccctcctggttctgacattgtttcagaactccat
caacttcaccattctcccaaattagtcgccttgcaggagatcctttcggagtgtgggatt
ggtgttgactcaggttctgaaggcactatttgtgtgggacagcacagagtcctgatattt
gcacagcataaggcccttttggatatcattgagagagacctgtttcacactcatatgaag
agtgttgcttacttgaggctggatggatcggttgaaccggaaaaacgctttgacattgtg
aaagccttcaattcagatcctaccatagatgttttgctgcttacaacacatgttggtggg
cttggtttgaacctgacatcagctgatacccttgtgtttatggagcatgactggaatcca
atgcgggatcaccaggctatggacagagctcacaggttgggccagcgaaaagttgtaaat
gttcatcgtctcattatgcgaggaacgttggaagaaaaagtaatgagtctccaaaggttt
aaagtgtcagttgccaatgcggtaatcaatgcagagaatgcaagtctgaaaacgatgaat
acagaccagttacttgatctatttacttcggccgaaagcaaaaagggggccagtagatcc
agaagaaccgatgaaaaatctgatgtggactcaatcttgccacgtagcgggaagggatta
aaagccattcttggaggattggaggagctgtgggatcaatcacaatacacggaagagtat
aacctgagccagttcttagcaaagcttaatggttaa
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integrated database retrieval system
