Nicotiana attenuata (coyote tobacco): 109211781
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Entry
109211781 CDS
T05870
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109211781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nau03400
]
109211781
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
109211781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
109211781
NCBI-ProteinID:
XP_019230900
UniProt:
A0A314KIC3
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MARNKEAVVLVIDVGPSMHSVLPEIEKVCSLLIQKKLIFSRYDEVGFVLFGTADTKNELT
EEVGGYEHVTVLRNIKVVDEDLVDALQNLPRGSVPGDFLDAIVVGMDMLIKKFGQTNKGK
KRLCLITNAISPIKDPFEGTKGDQVNTIATQMAAQGMKMDCVIVRMKQDLETNRRVMKEN
DVLLSVFSNKSSSKVVHVETPTSLLGALRTRNISPVTIYRGDFEVSSQLKIKVWVYKKTS
EEKFPTLKKYSEKAPPTDKFATHEIKVDYEYKSIEDPNKVVPPEQRIKGFRYGPQVVPIS
SAELEAVKFKPEKSVKLLGFTEASNIMRHYYLKDVNIFIAEPGNKKAILALSALARAMKE
MNKVAIVRCVWRQGQGNVVVGVLTPSVSDEDNTPDSFYFNILPFAEDVREFQFPSFRNLP
SSMQPNEKQQEAADKLVQMLDLAPPGKQEILPPDFTPNPVLERYYRYLDLKSKHPDAAVP
PLDETLRKITEPDVELLSQNKSIIEEFRRSFELKENPKLKKSTRRIMKERPSGSDGEGEE
FDKDADAKAIDSIGYSSKDKVEKIGDINPVKDFEEMMSRRDNPGWISKAIQDMKNKTFDL
VENSCEGDTYDKALECLVALRRGCILEQEPKQFNDFLCHLYIFCQEKDLRSFCQFLASHG
MTLITKTEAPDSEIPEHEARSFMVKPEPDSQNLKSEAKVEDDIMSIFLGGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaataaggaagcggtagtattagtgatagatgtgggtccttctatgcactca
gttttacctgagattgaaaaagtttgctcattgttgatacagaagaagctgattttcagc
agatatgatgaagtggggtttgtcttatttggaactgcagataccaagaacgaattgaca
gaggaagtaggcgggtacgaacacgtgacagttctgcggaatatcaaagttgtagatgaa
gatcttgttgatgctctacaaaaccttccacgaggaagtgttcccggagattttcttgat
gcgattgttgtcggaatggacatgttgattaaaaagtttggacaaaccaacaaggggaag
aaacgtctttgccttattacaaatgctatttctcccatcaaagatccatttgaaggaaca
aaaggagatcaagtaaacaccattgctacacagatggcagcacaaggcatgaagatggac
tgcgtaattgttagaatgaaacaagatttggaaacgaataggagagttatgaaagaaaat
gatgttctattatcagtattctcgaataaatcttcctcaaaagtagtacatgtggaaact
ccaacttctttgttaggtgcacttagaactcgtaatatatcaccagtcacgatatacaga
ggtgattttgaagtaagctcacaattgaagatcaaggtatgggtttacaagaaaacatct
gaagagaagtttcccactctaaaaaagtactctgagaaggctcctcccacagacaaattt
gccactcatgaaatcaaggttgattatgaatataaaagcatagaagaccctaacaaagtt
gtgccaccagaacaaaggattaaaggttttcggtatggacctcaagtagttcctatatcc
tctgctgagttggaggctgtaaagttcaaacctgagaaaagtgtgaagcttctaggattc
acggaagcttcaaatataatgcggcattactacctgaaagatgtaaatatcttcatagcc
gaacctggcaacaaaaaggccatccttgcactttctgctttggcaagggcaatgaaggaa
atgaacaaagtagcaattgtccgatgtgtatggaggcaaggacagggtaatgttgttgtt
ggggtcctaacaccaagtgtctctgacgaggataatactcctgattcattttacttcaat
attcttccctttgccgaggatgttagggagttccagtttccttctttcagaaatctgcct
tcgtcaatgcagccaaatgaaaagcaacaagaggcagcagataaattggttcagatgttg
gatcttgcaccacctggaaaacaggaaattttgccacctgactttacacctaatcctgtt
ttggagcgttactaccgctatcttgacttgaagtcaaagcacccggatgcagctgttcct
ccacttgatgaaaccctcagaaagataacagaacctgatgttgaacttctttctcaaaac
aagtccatcatagaggaattccgtaggtcctttgaactaaaagagaatccaaagctgaaa
aaatcaactagaagaattatgaaagagagaccttcaggatcagacggggaaggagaagag
ttcgacaaagatgctgatgccaaggctattgactccataggatactcatccaaagacaaa
gttgagaaaattggagacataaatcctgttaaagactttgaggagatgatgtctcgaaga
gataatccaggatggattagtaaggccattcaggatatgaaaaataagacctttgatctt
gtagagaattcttgtgaaggggatacatatgataaagcattggaatgtttagtggctcta
cgcagaggttgcatccttgagcaagaaccaaagcagttcaatgatttcctgtgccacctg
tatatattctgccaagaaaaagacctgagaagtttttgtcaatttcttgcatctcatgga
atgaccttgataaccaagacggaagctccagacagtgaaattccagaacacgaggccaga
agctttatggtcaagcctgaaccggactcgcaaaatttgaaatcagaggctaaagtagag
gatgatattatgagtatattcctgggaggaaaatag
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