Nicotiana attenuata (coyote tobacco): 109211911
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Entry
109211911 CDS
T05870
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109211911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109211911
03051 Proteasome [BR:
nau03051
]
109211911
Membrane trafficking [BR:
nau04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
109211911
Proteasome [BR:
nau03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109211911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
Ddi2_HDD
Rad60-SLD_2
Dsc3_N
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
109211911
NCBI-ProteinID:
XP_019231051
UniProt:
A0A1J6IMY0
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Position
2:complement(67441566..67449792)
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AA seq
548 aa
AA seq
DB search
MGGGDTTATTVKDEVAENNAGGGGETVTINVRCSNGSKFSVQASLDSTVGSFKSVLSQPS
DIPAEQQRLIYKGRILKDDQTLTSYGLEADHTVHLVRGFAPAASASATNAGNPNTNQNIP
GDAPPNVGGPFAGVGGAPLFPGLGSGGGPFGAGLPDFEQVQQQLTQNPDMMRDMMNMPLV
QNLMNNPEIIRNMIMNNPQMREIMDRNPELAHILNDPSTLRQTMEAARNPEIMREMMRNT
DRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGDTRNDSGANPFAALLGAQGGGQGG
NQATSPPVTGSETTANPPAPNTNPLPNPWASAGTGAAHMNTTARSNAAADTRAPPLGGLG
ALPDLQRMLGGMPDASSLNQLMQNPAISQMMQSLLSNPQYMNQISGLNPQLRSMLDSNPH
LREMMQNPEFIRQLTSPETMQQVMTLQQGLLSQLGRQQTNQGQGQDAGRTAFDNMGMEML
MNMFGGLGTGGLGVPNRSNVPPEELYATQLAQLQEMGFFDTQENIRALIATAGNVHAAVE
RLLGNTGQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaggcgatactactgctacaacggtcaaagacgaagtagccgagaataacgcc
ggcggtggtggtgaaacagttacgatcaacgttcgatgttccaacggctccaaattttcc
gttcaagcgagcctcgattccaccgtcggatcattcaagtccgtcctttctcagccgtcc
gatatccctgccgaacagcagaggttgatctataaaggccggatcttaaaggacgaccaa
accctaacaagctacggtctggaggcagatcacacagttcatctagttcgaggttttgcc
ccagctgcttccgctagtgcaaccaatgctggaaatccaaatactaatcagaatatacca
ggggatgccccgccaaatgtaggagggccatttgcaggagtaggtggagctccactcttt
cccggacttggaagtggtggtggtccatttggagctggtcttcctgattttgagcaggtc
cagcagcagctgactcaaaaccccgacatgatgagagatatgatgaatatgccccttgtt
cagaatctaatgaataacccagaaatcatccgcaacatgatcatgaacaatcctcaaatg
cgagagatcatggatcgtaatcccgagctcgctcacatactcaatgacccttctactctt
cgccagacaatggaggctgcacgaaaccctgaaattatgcgtgagatgatgcgcaatact
gacagggcaatgagcaacattgaatcctctcctgagggatttaacatgctaaggcgcatg
tatgaaaatgttcaagagccatttctgaatgcaacaaccatggctggagatacaagaaat
gattcaggtgcaaacccgttcgcagctcttttgggagcccaaggtggcgggcaaggcgga
aatcaggcaactagtcctccagttactggttccgagacaactgctaatcctcccgctccc
aatactaatccacttccgaatccttgggcatcagctggcactggagccgcccatatgaat
accactgctaggtcaaatgctgctgcggatactagggcaccccctcttggtggcttgggc
gctttgccagatttgcagcgaatgctaggtggcatgcctgatgcgtcttctctaaatcag
ttaatgcagaatccagccatctcacagatgatgcagtctctcctctcaaatcctcagtac
atgaaccagatttctgggctcaacccgcagctaagaagcatgcttgattccaacccccat
ctcagagaaatgatgcaaaaccctgaatttattcgtcagttgacgtcccctgagacaatg
cagcaagttatgactctacagcaagggctattgtctcaacttggtcggcagcaaacaaac
caaggacagggtcaagatgctggccgaacagcatttgacaacatgggaatggaaatgctg
atgaacatgttcggtggacttgggacggggggattgggtgtacccaacagatccaatgtg
cccccagaggaattatatgccactcagttagcccagttacaagaaatgggtttttttgac
actcaagaaaatatccgggcacttattgccactgcagggaatgtgcacgctgcggtagag
cgacttctagggaacactggacagtag
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