Nicotiana attenuata (coyote tobacco): 109212002
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Entry
109212002 CDS
T05870
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109212002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nau03041
]
109212002
Spliceosome [BR:
nau03041
]
Common components
Common spliceosomal components
SR proteins
109212002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
zf-CCHC_4
RRM_5
zf-CCHC_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109212002
NCBI-ProteinID:
XP_019231150
UniProt:
A0A0M9UMT6
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MPRYDDRSGNSTRLYVGHLSSRTRSRDLERVFSKYGRVRDVDMKHDYAFVEFSDPRDADD
ARYYLDGRDIDGRRIIVEFAKGVPRGPGGSREYLGKGPAPGSGRCFNCGLEGHWARDCKA
GDWKNKCYRCGERGHIEKKCPNSPKKLSRRDRSYSRSPVRSRSRSRSPRRRSYSRSRSYS
PSRSPAPRRGKVDIEKRSRSYSRSPEPRKASPSPSLSPPPKTRKNSPTPEEGSPMEATRT
TTREEGSYSQSPRERSASPLSPRRGDSPAPERDEDSPAEANGGSRSPSPKYQRNRADDDE
DEGENNNHRSGRESESP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgatgatcgatcgggaaatagcactcgtctctatgtgggccacttgtct
tcacggacccgttcacgtgatctggagcgtgtattcagtaaatatgggagagtacgtgat
gtggacatgaagcacgactatgccttcgtagaatttagtgatcctcgagatgctgatgat
gcaagatactatttagatgggcgggacattgatggccgccgcataattgtggaatttgct
aagggagtgccacgtggacctggtggttcgcgtgagtatcttggcaaaggacctgctcct
gggtcaggccgctgcttcaactgtggccttgaaggtcactgggctcgagattgcaaagct
ggggattggaagaataaatgttatcggtgtggagaaagaggccatatagaaaaaaaatgc
ccaaatagtcctaaaaaactcagtcgacgggatcggagctactcacggtcgcctgtcagg
tcaaggtcacgttcacgttctcctcgtcgtcgaagttacagcagaagtcgaagctatagt
ccgtcaagatctcctgctccaaggagagggaaagttgacatagagaagaggtcaagaagc
tacagtaggagccctgagccaaggaaggctagtccaagtcctagtctgagtcctccaccg
aagacaaggaagaacagcccaacacccgaagagggaagccctatggaagcaacgaggacg
acgaccagagaagaaggtagctatagccaaagccccagagagagaagtgcaagtccttta
agtcctagacgaggggatagccctgcacctgaaagggatgaggacagccctgctgaagct
aacggtggaagtcgcagcccgagtcccaagtaccagaggaaccgtgcagatgatgacgag
gatgaaggtgagaataataaccaccggtctggcagagagagtgagtcgccttga
DBGET
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