Nicotiana attenuata (coyote tobacco): 109212125
Help
Entry
109212125 CDS
T05870
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109212125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109212125
Membrane trafficking [BR:
nau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109212125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
109212125
NCBI-ProteinID:
XP_019231288
UniProt:
A0A1J6J6P6
LinkDB
All DBs
Position
2:complement(69210262..69224434)
Genome browser
AA seq
1058 aa
AA seq
DB search
MGTEYANGPAIPSRPVSPFSVAQSSTPFQSSGPVVGSEASAFRHASPSSSQITSPSSASG
AMVGTEASAFRTMPSGMPNDAARPPPTSASPYGPPAASPYQCFPAPQFSSTAGVPPPCTS
LAGQPVLRPPVRPVSGPFSTSHVSLNPQIQPPHGPMGFPPQSASMVQPGVVVPRSPVDTQ
FSAARATMHPSSPPAGPAYPAGRPGFQSAFPGYMSHQNTAGAQAQPRQSLAFPSQQGGYV
PTMAATSSPYLAQQGGYAAPPSAASQLGSSREQMQHPGSTPPTAVMQGLVEDFSSFSIGS
VPGSFDPGLDSKVLPRPLEGDLERNPLSEMYPMNCSSRYLRLTTSGIPNSQSLASRWHLT
LGAVVSPLAEAPNGEEVPVVNFAPTSIIRCKRCRTYVNPYVTFTDSGRKWRCNLCALLND
VPGEYFAHLDASGRRTDLDQRPELTQGSVEFIAPTDYMVRPPMPPLYFFLIDVSVSAVKS
GMLEVVSQTIKSCLDNLPGFPRTQIGFITYDSTLHFYNMKSSLTQPQMIVMSDLDDVFIP
LPDDLLVNLSESRTVVDAFLDSLPSMFQENVNVESAFGPALKAAFMVMSQLGGKLLIFQH
ALPSLGVGRLRLRGDDLRVYGTDKEHTLRTPEDPFYKQMAADFTKYQVAVNVYGFSDKYT
DIATLGTLAKYTGGQVYYYPSFQAAVHKEKLHHELARDLTRETAWESVMRIRCGKGVRST
TYHGNFMLRSTDLMALPAVDCDKAYAMQLSLEETLLTSQTVYFQVALLYTSSSGERRIRV
HTAAAPVVADLGEMYRLADTGAIVSLFTRLAIEKALTSKLEEARNFIQLRIVKALREYRN
LHAVQHCLGGRMIYPESLKCLPLYGLALCKSIAFRDGYADAQLDERCTAGYTMMALPVKT
LLKLLYPQLIRVDEYLLKKPSLAEDSIDIWNGLPLAAGSLNPQGLYLYDDGFRFVLWFGR
VLSPDILNNLLGENFAADFSKVSLRELDNEISRKLMGLLNKYRESDSSYYQLSYLVRQGE
QPREGYFLLANLIEDAVAGANGYLDWITQVHRQVQQNA
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgaatatgctaatggtcctgccattccctcgaggcctgtttctccctttagt
gttgcacaaagttcaacaccctttcaatcatctggccctgtggttggatccgaagcttct
gcatttcggcatgcttctcctagttcttcccagattacgtctccttcctctgcatctggt
gccatggttggaactgaggcctctgcttttagaacaatgccatcaggtatgcctaatgat
gcagctaggccacctccaacatctgcatctccatatggaccaccagctgctagcccttac
caatgctttccagcaccacagttttcttctacagctggggtacctccaccatgcacttca
cttgcaggccaacctgttttacgaccaccagttagacccgtttcaggtcccttctcaaca
tctcatgtttccctaaatccccaaatccaacctcctcatggtccgatgggattcccccct
caaagtgcgagcatggtgcaacccggtgtagttgttcctcggtcacccgtagatacccag
ttttctgctgccagggcgaccatgcatccatcttcaccaccagcaggtccagcttatcct
gctggcagacccggctttcaatctgcttttccagggtatatgagtcatcaaaatacagcg
ggcgcacaggctcaaccaagacaatctttagcctttccttctcagcaaggtggttatgtt
ccgacaatggcagcaacatctagcccctatcttgcccaacaaggaggctatgcagctcca
ccatcagcagcatctcaactgggtagctcaagggaacaaatgcagcatccagggtctaca
cctcctacagcagttatgcagggtttagtggaagatttcagttccttctctattgggtct
gttccaggatcatttgatccggggcttgattctaaagttctaccaaggccattggaaggt
gacctggaacggaaccctttgtccgagatgtatccgatgaactgtagctcaagatatttg
aggctaacgactagtggcataccgaattctcagtccttggcttcaaggtggcacttaact
cttggagcagttgtttcccctcttgctgaagctcctaatggggaagaagttccagtagtt
aattttgccccaactagcatcatacggtgtaaaaggtgccggacttatgtgaatccctat
gtgacatttacagacagtggaagaaagtggcgatgtaacttatgtgcattgcttaatgat
gttcctggcgaatattttgcccatttggatgccagtggcagaagaaccgatttggatcaa
aggcctgaacttacccaggggagcgtggagttcattgctcccactgattacatggtccgg
cctccaatgcctccactttactttttcctcatcgatgtatctgtatctgctgtgaagagt
ggaatgctcgaggttgtatcacaaacgatcaagagttgtttggacaatttgcctggcttt
cccagaacacagatcgggtttataacttatgacagtacattacacttttataatatgaag
tcatccttgactcagccacaaatgatcgtcatgtcagatctggacgatgtatttattccg
ttgccagatgatctccttgtcaatttgtcggaatcaagaactgtggtagatgcatttttg
gacagcttgccttcaatgttccaggagaatgtaaatgtggaatcagcatttggtccagct
cttaaagcagccttcatggttatgagtcaacttggtggtaaattgctgatctttcagcac
gctcttccatcattaggtgttggccgcttaaggctgcgaggagatgatcttcgtgtttat
ggaactgacaaggagcatacactgagaactccagaagatcctttctataaacagatggcc
gccgatttcaccaaatatcaagtagcagttaatgtatatggtttcagcgacaaatatact
gatatagctacattagggactcttgcgaagtatacaggtggtcaggtatattactatcca
agtttccaagctgccgttcacaaagaaaaattacatcatgagttagccagagatcttaca
agggagactgcttgggagtctgtcatgcgtataagatgtggaaaaggtgttcgatccact
acgtatcatgggaacttcatgctgagatctactgatctaatggcacttccagctgttgac
tgtgataaagcatatgcgatgcagttatcgcttgaggaaacattgcttacatctcagacg
gtctatttccaagtagccctattatacacttcatcttctggagaaaggcgcattagggtg
cacacagcagcagcacctgtggtcgcagacttaggagaaatgtatcgcctggctgatacg
ggtgccattgtttctctttttacgaggctggctattgagaaagctctgacctctaaattg
gaggaggctcgaaattttattcaactccggattgtgaaagctcttagagaatatcgaaat
ctccatgctgtccaacactgcctaggagggaggatgatatatccagaatctttaaagtgc
ttgcccttgtatggattagcattatgtaaatcgatagccttccgtgatgggtatgctgat
gctcagcttgatgaacgctgcactgctggatacaccatgatggctttgcctgttaaaaca
ttgttgaaacttctttatccgcagttgattcgtgtagatgaatatcttctaaaaaaacca
tctttggctgaggattctatagacatatggaatgggcttccacttgctgcagggagttta
aatcctcaaggtctctatctctatgacgatggttttcggtttgtcttgtggttcggtagg
gtgctttcacctgatatacttaacaatttgcttggggaaaactttgctgctgacttctct
aaggtttctcttcgagaactagataatgaaatatcaagaaaattgatgggcttgcttaac
aagtacagggaaagtgacagctcatattatcaattaagttatcttgtgagacaaggtgaa
cagcctagagaaggatacttcctgcttgcaaatctaattgaggatgcagttgctggtgca
aatggttatcttgattggattacgcaagttcaccggcaagtccagcaaaatgcataa
DBGET
integrated database retrieval system
