Nicotiana attenuata (coyote tobacco): 109212395
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Entry
109212395 CDS
T05870
Name
(RefSeq) SWI/SNF complex subunit SWI3C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109212395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109212395
03036 Chromosome and associated proteins [BR:
nau03036
]
109212395
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109212395
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109212395
PBAF complex
109212395
GBAF(ncBAF) complex
109212395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Amelogenin
Motif
Other DBs
NCBI-GeneID:
109212395
NCBI-ProteinID:
XP_019231580
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MVEIPAQGQSGGIDILWHDSHVQLSHIRLDGQEIHAMIQVLAEDVGSLTNSVLSKVKSAE
RALRSIGALSAKRNAMFGIYGAFDLSTIQSVSGYKHTCSIFLTTYRFVLEINVSVCVAHA
FVFLLLQADWFSPNTVHRLERQVVPHFFSGKSTEHTPEKYMECRNCIVAKYMELPEKHLS
VADCHGIVAGVSADDVTRIARFLDHWGIINYCAVPPKAEALKDVTLYEDSNSDLCVPVAG
LKSIDSLVQFDKPKCCLKARDVYPELVRDFDDDSDFDNSIRELLSELRCNCCSRPVSLSY
YQSQKEIDILLCLDCFHEGGFVTGHSSLDFVKVSSMKDYGDLDGDTWTDQETLLLLEGMQ
LYNENWNQIAEHVGTKSKAQCILHFVRLPVDGAPLENIELPGASGPSSSFAGEDRNKSYS
NLNGNLAGPSTENLDSDSKFPFENCGNPVMSLVAFLASAVGPRVAAACAHASLAALSKDD
TLTSLNMTQIDGSTANNGISVGRIHGKDGSPHGDVGNSYQLKDEKPGGQGPWGQHDVGGA
PVSTERVRAAAKVGLAAAAIKAKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEVET
LLMKECEQLERTRQRFAAERARMMTVQPGSVRVSRPMGVSGAGAPVVSNTGNSRQQAVSG
PLQQNFISGYGNNQPMHPHMSFMPQQGMYGFGPRLPLSAIHPSSSTPGMFNAPASSQPAL
SHSMLRPVSGTKSGLG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggtggagatccctgctcagggacagtcggggggtattgacatcctttggcatgactcc
catgtccaactcagtcatatccgtcttgatggtcaggaaatccatgctatgatccaggta
ctggctgaagatgttggcagtctgacaaattcagtgttatcaaaggtgaaaagtgctgaa
agagctctaaggtccattggagctttaagcgcaaagcgaaatgctatgtttggcatttat
ggtgcatttgacttgagcacaatacagagtgtttctggatacaagcatacctgcagtata
tttctgaccacctatcggtttgttcttgaaatcaatgtcagtgtctgtgttgctcacgcc
tttgtattccttcttctgcaagcagattggttttcacctaatacagtgcacagattggaa
agacaagtggtgccgcattttttctctggaaagtcaactgaacatacaccagaaaaatac
atggaatgcagaaattgtatagttgcaaagtatatggagttgcctgaaaagcacttgtca
gttgctgattgccatgggattgtagctggtgtcagtgctgatgatgtaactcgaattgca
aggtttcttgatcattgggggatcatcaactactgtgctgttcctcctaaagcggaggcc
ctaaaagatgtcacattgtacgaggactcaaacagtgatctctgtgttccagtggctggt
ttgaagtctattgacagcttagtccagtttgacaagcctaaatgttgtctcaaggcgaga
gatgtttatcctgaacttgtgcgtgattttgatgatgactccgactttgacaactcaatc
cgagaactgttgtctgaactacgatgcaattgttgttctcggcctgtttcactgtcgtac
tatcagtcacagaaagagattgatattctattgtgtttggattgcttccacgagggtgga
tttgtcactggtcactctagcttggatttcgtcaaagtaagctctatgaaagattatgga
gatctagatggggatacttggactgaccaggaaacgctattgcttctcgagggaatgcaa
ctctacaatgaaaactggaatcaaattgcagaacatgttggcaccaagtcaaaggcacag
tgcatccttcattttgtccgcctgcctgtggatggtgccccattggaaaatattgaactt
ccaggtgcatctggtccctcaagttcttttgcgggtgaagatcgtaacaaatcttactca
aatttgaacgggaatcttgcaggaccaagcactgaaaaccttgattctgatagcaaattt
ccttttgaaaactgtggaaatccagtaatgtccctggttgcttttttggcatctgctgtg
ggaccgagagttgctgcagcatgcgcccatgcttccttggcagctttatctaaggatgat
actttaacatcactgaacatgactcagatagatggatctacagctaataacgggatcagt
gtaggaagaattcatggaaaggatggaagtcctcatggagatgttggaaattcttatcag
ctaaaagatgaaaagccgggaggacaaggtccatggggtcaacacgatgttggaggtgct
ccagtatccactgaaagagtaagagctgctgctaaagttggtcttgcagcagcagctata
aaggcaaagctttttgctgaccatgaagaacgtgagattcaacggttatctgcaaatata
gtcaaccatcagttaaagaggttagagctgaagctgaagcagttcgcagaggtggagacc
ttgttaatgaaagaatgtgaacaactggagagaacaaggcaacgctttgctgcagagcgt
gctcggatgatgacagttcaacctggttcagttcgagtatcccgaccaatgggtgtgtct
ggtgctggtgcaccagtggtcagtaacacaggaaatagtaggcaacaagctgtttcaggt
cctctacaacaaaattttatttctggatatggaaacaaccaaccgatgcatcctcacatg
tcatttatgccgcaacaagggatgtatggatttggccctcggctgcctctctcagcgata
cacccttcctcttcaacacccggtatgtttaatgctccagcaagttcccagcctgctctc
agtcattcaatgcttagacctgtatctgggacaaaatctggtttgggttga
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