Nicotiana attenuata (coyote tobacco): 109212437
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Entry
109212437 CDS
T05870
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03030
DNA replication
nau03420
Nucleotide excision repair
nau03430
Mismatch repair
nau03440
Homologous recombination
nau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109212437
03420 Nucleotide excision repair
109212437
03430 Mismatch repair
109212437
03440 Homologous recombination
109212437
03460 Fanconi anemia pathway
109212437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nau03000
]
109212437
03032 DNA replication proteins [BR:
nau03032
]
109212437
03400 DNA repair and recombination proteins [BR:
nau03400
]
109212437
Transcription factors [BR:
nau03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109212437
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109212437
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109212437
MMR (mismatch excision repair)
109212437
DSBR (double strand breaks repair)
HR (homologous recombination)
109212437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
109212437
NCBI-ProteinID:
XP_019231634
UniProt:
A0A314KHG3
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MPVNLTANAIPAIIAGDVNSKPVVQVLDIKLIGAAADRYGLLISDSESSQQAMLAAQLND
RVKTGRVRKTSVIQLIEYICTTVKNRKIIVVINMETIIPECEIIGNPKVLVESNFGAQKA
ISNGISGSGIFNNGNLSAQRSGQTSFANSNNLSSLNSGNSMQNYPPAIQPAYQPPPNYKS
HGTIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNSRGDGKVFSFDLLDSDG
GEIRVTCFNAVVDRFYDKIEAGKVYMISRGNLKPAQKNFNHLKNEWEIFLEITSTVDLCP
DEDTTIPRQQFSFRPISDIESAESNSIIDVIGIVIAVNPSVPILRKNGMETQRRILNLKD
QSGRSVELTLWGDFCNREGQKLQEMAEAGFSPVLAVKAAKVSDFTGKSIGTISSTQLFID
PDFAEAQTLREWFDRGGKDVASQSISRENMPVGSKSEIRKTVSQIKDEGLGRSDKPDWIT
VKATITFVKTDSFCYTACPLMIGDRQCNKKVTRSGNSRWHCDRCNQEFDECDYRYLLQAQ
IQDHTGLTWVTAFQESGEEILGCPAKELHMMNEEADDTRFSEIIRKCLFTQFLFRLKIKE
EPYCDEQKVKITVIKAEKVKHSAESRYLLDLISKFRPS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaacttgaccgcaaacgcgatcccggcgattatcgccggcgacgtgaactca
aagccagtggttcaggtattggacatcaagctaatcggcgccgctgcggatcggtacgga
ctcctaatctcagattctgagtcaagtcagcaggctatgctggctgctcagcttaatgac
cgagtcaaaacgggccgcgttcgcaaaacctccgtcattcagttgattgagtacatttgt
accactgttaaaaatcgcaaaattattgttgtcatcaacatggaaactattataccagaa
tgtgagataattgggaatcctaaagtgcttgtagaatctaattttggggctcagaaagct
atatctaatggcatttctgggtctggaatctttaacaatggtaacttgagtgctcaaaga
tctggccaaacaagctttgctaacagcaacaacttgagctccctaaactcaggtaatagc
atgcagaactacccacctgcaattcaacctgcatatcaacctcctccaaattacaaaagc
catgggacaataatgaagaatgaagcacctgcccgcattattccaattgctgctttgaac
ccctatcagggtcggtgggctattaaggctagagtgactgcaaagggggatctacgtcgc
tataataattccagaggagatggaaaggtcttctcatttgatctccttgactctgatggg
ggtgaaatacgtgtcacttgctttaatgcggttgttgatcgcttttatgacaaaattgaa
gctggaaaagtgtacatgatatcaaggggcaacttgaaacctgctcagaagaacttcaac
catctgaagaatgaatgggaaatattcttggagataacttcaactgtagatctctgtcca
gatgaagataccactataccaagacagcagttctcattcagacctattagtgatattgaa
agtgcagaaagcaattcaataatagatgtgattggaattgtaatagctgtcaatccttct
gttccgatcctgagaaagaatggaatggaaactcaaagaagaatcttgaatctaaaggac
cagtctgggcgaagtgttgagttgacactatggggagacttctgtaacagggaaggtcaa
aagctgcaagaaatggcagaagctgggttttcccctgttttagctgtcaaagctgcaaaa
gttagtgacttcactgggaaatccattggaaccatttcttccactcaactgttcatagat
ccagattttgcagaggctcagactctaagagagtggtttgatcggggaggaaaagatgtt
gcttctcaatctatatctagggaaaacatgcctgtaggatcaaaaagtgagatacgtaag
accgtgtctcagatcaaggatgaagggcttggtaggtcagataaaccagactggattaca
gttaaggcaactataacattcgtcaaaactgacagcttctgttacactgcttgccctctg
atgattggagatagacaatgtaataagaaagttaccaggtcaggaaactcgagatggcac
tgtgataggtgcaatcaagagtttgacgaatgtgattacagataccttcttcaagctcaa
attcaagatcatactgggttgacatgggtgacagctttccaggaatctggggaagagatt
ttgggctgtcctgcaaaggagctacacatgatgaatgaagaggctgatgataccagattt
tctgaaattattagaaaatgtctctttacacaatttctattcaggcttaaaatcaaagag
gaaccttactgtgatgagcagaaggtgaagattacagttatcaaggcagagaaagtgaaa
cattctgcagaaagcagatatctccttgatttaatttcaaaattccgtccttcttga
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integrated database retrieval system
