Nicotiana attenuata (coyote tobacco): 109212482
Help
Entry
109212482 CDS
T05870
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109212482
03036 Chromosome and associated proteins [BR:
nau03036
]
109212482
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109212482
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
Pre-60S particles
Helicases
109212482
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109212482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
FlpD
Motif
Other DBs
NCBI-GeneID:
109212482
NCBI-ProteinID:
XP_019231680
UniProt:
A0A1J6IQR5
LinkDB
All DBs
Position
2:72830209..72835027
Genome browser
AA seq
685 aa
AA seq
DB search
MPALVVSETIGSEEPKELKKKMKKSEKGSSADTLKKSKKTKIDSGSDSEELKKSKKKDKK
RKALNLDDDEEDDSSEILEPSNLNGDDKTKKKKKAKLVENDDDEEKKEEKEEDPNALSNF
RISVPLREALIAKGIQALFPIQAMTFDTIFDGNDLVGRTRTGQGKTLAFVLPILESLTNG
PTKASRKTGYGRAPSVLVLLPTRELALQVFADFEFYGRAVGLTSCCLYGNSPMGQQQVQL
KRGVDIVVGTPGRVKDHIERGNIDFRSLKFRVLDEVDEMLKIGFVDDVEFILGKVEDASQ
VQTLLFSATLPSWVKHISSKFLKPDKKTADLVGDEKMKASKNVRHIIIPCSSSASTQLIP
DIIRCYSSGGRTIVFTETRGYASELAGLLPGAHALHGEIQQSQREVTLSGFRSGKFLTLV
ATNVAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKKSNISRIE
RESGVKFEHLSAPQPADVAKAAGKEAAEAVAEISDSVIPAFKAAAEELLNTSDLSPAELL
AKALAKAAGYSEIKTRSLLSSMENCVTLLLECGRPIFAPSFAYNVLRRFLPEDKVESIKG
LTLTADGKGAVFDVSADDLVMFLAGKNTQGVNLEVVKELPRLQEKDQARGGRFGGGRGGF
SDRRGRARFSGGRGGRGRGNFGRRW
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacttgttgtaagtgaaacaattgggtctgaagagccgaaggagctgaagaag
aagatgaagaagagcgaaaaaggatcatccgccgacacccttaaaaagtcgaaaaagacc
aagattgattctgggtctgattcagaagagcttaagaagagtaagaagaaagataagaag
cgaaaagctttaaacttggatgatgatgaggaggatgatagttcggagatactggagccg
agtaatttgaatggggatgacaagacgaagaagaagaaaaaggctaaattggtggagaat
gatgatgatgaggagaaaaaggaagagaaagaggaggatcctaatgctttgtctaatttt
aggatttctgttcctttaagagaggctctgattgctaaggggattcaagcgctctttcct
attcaagctatgacttttgatactatctttgatggcaatgacttagttggtcgaactcgc
actggtcagggtaaaacattggcctttgtgctgcccatattggagtccctgacaaatggt
cctactaaagcgtctcggaaaacagggtatgggagggctcctagtgttttggtgctctta
cctactagggaattggcacttcaggtgttcgctgactttgaattttatggtcgggccgtg
gggcttacttcatgttgtttgtatggaaattctcctatgggacaacaacaagtgcaattg
aaacgaggagttgatattgttgtgggtactcctggaagagttaaggaccacattgaaaga
ggaaatattgatttcaggtctctaaagttccgtgttcttgatgaagttgatgaaatgctg
aaaattggttttgttgatgatgtggaatttatattaggcaaggtagaagatgcaagccaa
gttcaaacacttcttttcagtgccactttgccaagctgggtgaagcatatatcttctaag
tttctcaaacctgataagaaaacagctgatcttgttggtgatgagaaaatgaaggccagt
aagaatgtgagacatattattataccatgctctagttcagccagtactcagctaattcct
gatattattcgatgctacagcagtggtggccgcactattgttttcaccgagacacgaggt
tatgcttcggagctggccggcttattgcctggggcacatgctttgcatggagagatacaa
cagtcccagcgtgaggtaacactttctggattcagatcaggaaaattcttgacattagtg
gccacaaatgtagcagcccgtggattggatattgacgacgttcaattaattattcagtgt
gagcctccacgcgatgtcgaagcgtatattcatcgatctggaaggacaggacgggcagga
aatactggtgtggcggtaatgctttatgatcctaagaagtccaacatttctaggattgaa
agagaatctggtgtgaagttcgagcatctatctgctccgcagccagctgatgttgctaaa
gcggctgggaaagaagcagcagaagcagttgctgaaatttctgatagtgtaatacctgct
ttcaaggctgctgctgaagaacttctaaacacctctgacctatcaccagcagaattgctt
gccaaggcacttgccaaggcagctggctactctgagatcaagactcggtcgcttctttct
tccatggagaactgtgttactctacttcttgagtgtgggaggcccatatttgcaccttcc
tttgcatataatgttttgcggaggttcctaccagaggacaaggttgaatcaatcaaaggt
cttactttgacagctgatgggaagggtgcggtttttgatgtatctgctgatgatctggtt
atgtttctagcagggaagaatacccaaggtgtaaacttagaggtagtaaaagaactgcct
cggttgcaagagaaagaccaggcaagaggtggaagatttggtggtggtcgtggtggcttc
tctgataggagaggtagagctcgcttttctggaggcagaggtggaagaggtcgcggaaac
ttcggccgtagatggtga
DBGET
integrated database retrieval system
