Nicotiana attenuata (coyote tobacco): 109212805
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Entry
109212805 CDS
T05870
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109212805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nau02000
]
109212805
Transporters [BR:
nau02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109212805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
109212805
NCBI-ProteinID:
XP_019232032
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MEKKEKEKEMRNSRRQLKAMLRKNWLLKIRHPFTTCAEILLPTLVMLLLIAVRSKSDIRI
HPAQPYIRKGIGMFVEVGKGDTSPPFNQVLERLLAKGEYLAFAPNTTETRMMINILSLKF
PLLRLVTRVYEDEEALETYIRSDLYAAYDQTKNLTNPKIKGAVVFHEQGPQSFDYSIRLN
HTWAFSGFPDVKNIMDTNGPFLNDLSLGVNTIPILQYGLSGFLTLQQVMDSFIIYAAQET
MTNLLRLPSHSLDRDAQLKIPWTQFSPSNIRLAPFPTREYTDNEFQSIVKKVMGVLYLLG
FLYPISRLISYSVLEKELKIKEGLYMMGLKDEIFHLSWFITYAIQFALSSAILTLCTMST
LFQYSDKTLVFAYFLSFGLSGITLSFMISTFFTRAKTAVAVGTLSFLGAFFPYYTVNDET
VSMIVKVTASFLSPTAFALGSINFADYERAHVGLRWSNMWRESSGVCFLVSLLMMLLDSL
LYFAVGLYFDKVLHKENGFCYPIRSLLHKCFGRKKNTSDDYASTSEVKFAVNHDETSGTD
FIKDVSGPILEAMSLEMKQQELDGRCIQIRNLRKVYATNRGNCCAVNSLQLTLYENQILA
LLGHNGAGKSSTISMLVGLVSPTSGDALVLGKNILTDMDEIRKSLGVCPQYDILFPELTV
KEHLEIFADVKGVPEDAKEKAVTEMVDEVGLADKLNTVVKALSGGMKRKLSLGIALIGNS
KVIILDEPTSGMDPYSMRLTWQLIKRKKKGRIILLTTHSMDEADVLGDRIAIMANGSLKC
CGSSIFLKHQYGVGYTLTLVKTAPGASVAADIVYRHVPSATCVSEVAAEVSFKLPLASSS
SFESMFREIERYMRRSNPEYETTDYREVDNLGIESYGISVTTLEEVFLRVAGGDFDQAQG
LEEKADPTFCDSVDLKVCQTNTSKTFFPSKLCGSYFRVIWLMLTLIGSACSLIWAAVSSV
ISLVTMQCCCCCILSRSTFWKHSKALLIKRAKSAQRDRKTIVFQLLIPAFFLLLGLLFLK
LKPHPDQQPVFFTTSYFNPLLSGGGGGGPIPFELTSPIAKEVSDHVHGGWIQKYRETTYR
FPDSAKAMNDAIEAAGSTLGPVLLSMSEYLMSSFNESYQSRYGAIVMDNQTGDGSLGYTV
LHNSSCQHSAPTFINLMNSAILRLATHNENMTILTRNHPLPQTASQHQQHHDMDAFSAAV
VINIAFSFIPASFAVAIVKEREVKAKHQQLISGVSILSYWASTYIWDFISFLFPSSFALV
LFWIFGLEQFIGKDSLIPTILLFLEYGLAMASSTYCLTFFFSEHSMAQNVVLLVQFFTGL
ILMVLSFIMGLINSTTHLNSLLKNFFRLSPGFCFADGLASLALLRQGMKNGSRDNVLDWN
VTGAAILYLAAEAVVFFLLTLGLEFLPQQKRSLYRVHEWWKSLGKSRHAISFGSSEPLLR
PPSGDVASELDEDIDVKAERDRVLSGSTDNAVIHLCNLRKIYPGGKSQIPKVAVHSLTFS
VQEGECFGFLGTNGAGKTTTLSMLSGEENPSDGTAFIFGKDIRSDPKVARRHIGYCPQFD
TLLEFLTVQEHLELYARIKGVPEYELEDVVMQKLLEFDLMKHANKPSFALSGGNKRKLSV
AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALCTR
IGIMVGGRLRCLGSSQHLKTRFGNHLELEVKPVEVSCLDLENLCLLIQEKLFDIRPHSRS
ILNDIEVCIGGTNSIASEDVSAAEISVSKEMIMAVGQWFGNEERVKALVSATDDSCKIFG
DQLSEQLDRDGGLPLPIFCEWWLAKEKFSKIHSFIQSSFPGAAFQGCNGLSVKYQLPCGE
GLSLADVFGYIERNRNQLGISEYSVSQSTLESIFNHLAASS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaagagaaagagaaagaaatgaggaattcaagaaggcaactcaaagctatg
cttaggaaaaattggctcctcaaaattagacacccttttaccacttgtgctgagatttta
ctcccaactcttgtaatgctgttgttgattgctgtgaggagtaaatctgatatccgcatc
cacccagctcagccgtatatccggaaagggatagggatgtttgtggaagttgggaaaggt
gatacttctccccctttcaaccaagttctggagcgactattggccaagggggagtacttg
gcatttgcacctaatacaactgagacaaggatgatgatcaacattttgtctctaaaattt
cccctactgaggctagttaccagagtttacgaagacgaagaagcacttgaaacatatatc
cgttctgatctttatgctgcttatgaccaaactaagaaccttacaaaccccaaaatcaaa
ggagcagtagtatttcatgagcaaggtcctcagtcgtttgattatagcatacgcctaaac
catacgtgggccttctcaggatttcctgatgttaaaaacataatggacacaaatggtccg
ttcctgaatgacttgtcattaggcgtcaataccataccaattttgcaatatggtctcagt
gggtttttaacactccaacaagtcatggactcattcataatatatgcagctcaagaaact
atgacgaacttattgaggttgcctagccactctcttgatagagatgcccagctcaagata
ccatggactcagtttagtccttcaaatataagacttgctccttttccgactcgtgaatat
accgataatgaattccaatccattgtcaagaaagtcatgggagtgctgtacttgctgggg
tttctttatccgatttctcgtctgataagttattctgtcttagaaaaggagctcaagata
aaagagggtctttacatgatgggtttgaaagatgaaatattccatctatcttggtttata
acatatgctattcagtttgctctttcttctgcgatacttacactgtgcaccatgagtacc
ctgtttcaatacagtgataagacgttggtgtttgcgtacttcctttcctttggtctcagt
ggaataactctgtcatttatgatttccaccttcttcacaagagcaaaaactgcggtagct
gtcgggaccctttctttccttggggcattctttccctattatactgtcaacgacgaaaca
gtctccatgatagtgaaagtgactgcttcttttctttcacctacggcctttgcattagga
tccatcaattttgctgactatgaacgtgctcatgtcggactccgttggagtaacatgtgg
cgggaatcttcaggagtttgctttttggtctctctcctcatgatgttacttgacagtttg
ttgtactttgcagttggtctgtattttgataaggtcctccacaaggagaatggattttgt
tacccaatacgttccctgcttcacaagtgctttgggaggaagaaaaataccagtgatgat
tatgcatccacctcagaagtcaaattcgctgtgaatcatgatgaaacaagtggcaccgat
tttataaaagatgtgtctggaccaattctagaagcaatgagcttggagatgaagcagcaa
gaattagatggaagatgtattcagatcaggaatctgcgaaaggtgtatgctacaaacagg
ggaaattgttgtgctgttaattctttacaactgactttgtacgagaatcagattctggca
cttttaggacacaacggggctggtaaaagcagtacaatatccatgcttgttggtctcgtt
tctcctacttctggagatgctctggtgttgggaaagaacatcttaactgacatggatgaa
atacggaagagtctgggagtctgcccccagtatgatattctttttcctgaattaactgtg
aaggaacatttagaaattttcgctgatgtaaagggtgttccagaagacgctaaagaaaaa
gctgtgactgaaatggttgatgaagttgggttggcagacaaacttaatactgttgtcaaa
gctctttctggaggtatgaaaaggaagttgtcccttgggatagctcttataggaaacagt
aaggttattattcttgatgaaccgacaagtggaatggatccatactctatgcggttaact
tggcagctgattaaaagaaaaaaaaagggaagaatcatattactcacaacacactccatg
gatgaagctgatgtgctaggagatcggattgctatcatggcaaatggatctctaaagtgc
tgtggaagttcaatcttcttgaaacatcagtatggggttggttacactcttactctggtt
aagactgcaccaggtgcctcagtagctgctgatattgtttaccgtcatgtaccatctgca
acatgcgttagcgaagttgctgcagaggtttccttcaagcttcccctagcatcctcctct
tcctttgagagcatgtttcgagaaatagagcgctacatgagaagatccaaccctgaatat
gaaacaacagactacagagaggtcgacaatcttggtattgagagctatggcatatctgtt
acaactctggaggaagtgtttctgagggttgctggtggtgacttcgatcaagcacagggc
cttgaggagaaagcagatccaactttttgcgattctgttgatttaaaagtgtgccaaact
aacacttctaagacattcttcccttccaaattatgtggaagctattttagagtcatatgg
cttatgctgaccttgattggttcagcttgtagtctaatctgggctgcggtttcaagtgtg
attagccttgttacaatgcagtgctgttgctgttgtatactctcaaggtctactttctgg
aaacactcgaaagccctacttattaagagagcgaaatcagctcaaagagatcggaaaaca
attgtgttccagttgttaattcctgctttctttttgcttcttggtctgctgtttcttaag
ctaaagccacatcccgatcagcagcccgtcttcttcacaacctcgtacttcaatccttta
ttaagtggtggaggaggaggtggtccaattccttttgaactcacatcgcctatagcaaag
gaggtttctgatcatgtccatggaggctggatccaaaagtatcgggagacaacatacagg
tttcctgattctgctaaggcaatgaacgatgccatagaagcagcaggatcaactttgggc
cctgtcctactatcgatgagtgaatatcttatgtctagctttaatgaatcttatcagtca
aggtatggagcgatagtcatggataatcagactggtgatggtagccttgggtacactgtt
ctacacaacagttcttgccagcattctgctccaacatttatcaatttgatgaattcagca
atactcaggctagctacacataatgaaaatatgacaattctcactcgtaaccaccctttg
ccgcagacagcaagtcagcatcagcaacatcatgatatggacgccttctctgctgcagtt
gtaatcaatatagccttttctttcattcctgcctcattcgctgtggcgattgtcaaggaa
cgtgaagtgaaagctaagcatcaacagctaatcagtggggtgtccatactctcatattgg
gcttccacatatatatgggacttcatcagcttcttatttccttcatcttttgcattagtt
ctcttttggatatttggtcttgagcaatttattggaaaggattctctcatcccaacaatt
ctgttgtttcttgaatatggattagcaatggcgtcatcaacatattgcctcactttcttc
ttttccgagcacagcatggctcagaatgttgtcctcctcgtccaatttttcactggcctc
attcttatggttctatccttcataatgggacttataaattctacaacacacttaaattct
ctgctcaagaacttttttagactgtcaccgggattttgcttcgctgatggattagcttca
ttggctcttttaagacaagggatgaagaatggatctagagataacgttcttgactggaat
gtgactggtgctgctatattatacttggctgctgaggccgttgtgtttttccttttaact
ctggggcttgaattcttgcctcaacaaaaaaggagtctttacagagttcatgagtggtgg
aaaagcttgggaaaatctaggcatgctatttccttcgggtcttcagaacctcttctgcga
ccaccctcaggcgatgttgcttctgaattggacgaagacatagatgttaaagcagagaga
gacagggttttatctggctcaactgataatgctgttatccacctctgtaatcttcgaaag
atatatcctggagggaagtcccaaattccaaaagttgctgtgcattcactgactttctct
gtccaagaaggagagtgttttgggttcctaggaactaatggagcagggaagacaacaaca
ctgtcaatgctatctggagaagaaaaccctagtgacggaacggcattcatttttggtaaa
gatatacgttcagatcccaaggttgctcgtagacatattggatattgtcctcagtttgat
actttacttgaatttctgaccgtccaagagcatcttgagctctatgcaagaattaaagga
gtaccagagtatgaattggaagatgttgttatgcaaaagttgctcgagtttgacctgatg
aaacatgcaaataaaccatcctttgccttaagcggaggaaacaagcgcaagttatctgtt
gcaattgcaatgattggagatccgcctatcgtcattcttgatgagccatccacaggtatg
gatcctattgccaaacgtttcatgtgggaagttatttctcgtctgtcaactagacgagga
aagacagctgtaattttaactactcacagcatgaatgaggcgcaagctctgtgcactagg
attgggataatggttggaggcaggttgaggtgtcttggtagttctcagcatttgaaaacc
cgcttcgggaatcatcttgaactagaggttaaaccagttgaagtcagctgtttggatctg
gaaaatctctgcctactaattcaagagaaactatttgatattcgtcctcactctaggagt
atattaaatgatattgaagtttgcattggaggtaccaactctatagcctcagaagacgta
tcggcagcagaaataagcgtatcaaaggaaatgatcatggccgttggacagtggtttggc
aatgaagaaagggtgaaagcactagtatctgcaactgatgactcttgtaaaatttttggt
gaccagttgtcagagcagttagatcgtgatggtggactcccgttgccgatattctgtgag
tggtggttggctaaggagaaattttcgaaaatccattcattcattcagtcttcatttcct
ggcgcagcatttcaaggttgcaatggattgagtgttaaataccagttgccttgtggagaa
ggtctttcacttgctgatgttttcggatacatagagaggaacagaaaccaacttgggata
tcagagtacagcgtcagccaatctacacttgaatcgatatttaatcatttagcagcaagc
tcctga
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