KEGG   Nicotiana attenuata (coyote tobacco): 109212813
Entry
109212813         CDS       T05870                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03030  DNA replication
nau03410  Base excision repair
nau03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109212813
   03410 Base excision repair
    109212813
   03420 Nucleotide excision repair
    109212813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nau03032]
    109212813
   03400 DNA repair and recombination proteins [BR:nau03400]
    109212813
Enzymes [BR:nau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     109212813
DNA replication proteins [BR:nau03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    109212813
DNA repair and recombination proteins [BR:nau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      109212813
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 RNase_H_2 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 109212813
NCBI-ProteinID: XP_019232042
UniProt: A0A1J6KI26
LinkDB
Position
Unknown
AA seq 2219 aa
MNGGGDNRRRDWRDTTRISKKQKLILSSEEQLECKLGFDVFTEGDKRLGWLLTLASSSWE
DQETRKVYSCVDLYFVCQDGSTFKAKYKFRPYFYVATKDKMEMDVEAYLRRRYESQIADI
EILEKEDLDLKNHLSGLRRLYLKISFDTVQQLMHVKRDLTHIVERNQTKFDTIEAYESIL
TGKSKQRSQDFIDYITDLREYDVPYHVRYAIDNDVRCGQWYDVSVSSSGVMLEKRTDLLQ
RAEVHVCAFDIETTKLPLKFPDAEYDSVMMISYMVDGQGYLIINRECVAEDIEDIEYTPK
PEYEGHFKVTNVKNEEGLLRHWFAHMQVVKPGIYVTYNGDFFDWPFLETRATHFGLSMKD
ELGFSCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDM
VRFAMEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEML
LMVQAYKANVICPNKHQSDPEKFYGSQLLESETYIGGHVECLESGVFRSDLPTSFKLDPS
AYELLINNLDRDLQYAIVVEGKMDLESVINYDEVKNAVMEKLMRLRDNPLTEECPLIYHL
DVAAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKKCLRKLEWVWRGETYMAKRSDYYH
IKRQLESELVEVGDGQRSQSFLDLPKADQQAKLKDRLKKYCQKAYKRVLEKPVTELREAG
ICMRENPFYVDTVRSFRDRRYEYKGLNKAWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ
LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIW
CALPGSFPENYTFKTKDPKKKLTISYPCVMLNVDVARNNTNDQYQTLKDPINKTYTTHSE
CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ
AELFDKFLHGSTLEECYSVVASVADRWLDLLDNQGNDIADSELLDYISESSTMSKSLADY
GEQKSCAVTTAKRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAIPVAIFETNAEIM
RFYVKKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPEWLH
KKVREKEDRFRQRKLNDIFSSVNRDDAVPSKNSKNQQNIEDLEDFRHSGKSSIFGPRPVV
HRHGVNKDHPVNTSDQVDNQQQSVHASSLCKMLPSQEIAAVEDIDRNVDYHGWLQQKKRK
WKEIREGRKRQRLDTSRTVNHVNGSTELSHHTVNHKRQGRTGVNSYFERHELALTRSHWQ
IVQLEPTSQHGQFFAWVVVEGAMHKISVTIPRVFYLNSKAPITEEFPGRRVNKILPHGRH
SYNLIEVIIDEDQFKSESKKLAAHLADPEVEGIYETKVPLEFSAILQMGCVCKVDKAAKK
RNPQDGWSLSELHMKTTTECPYLDQSITFFYLYHSLSDGRAIYVGYFPSSKMIHVVVVNP
FQNKELSPHILERHYYEACQTLSGQPITQKEGISFKVDYVKHIKEAERILQRIINEHRHH
GPAVAMIECPDAHSLKSGIRALDDFPCISIPCNARDSQYQALGWQNVAAKIGMQRCVTSS
QWLNERITLSRYAHVPIGNFDVDWLMHTADIFFSRALRDQQQVLWISDNGIPDLGGVNDE
VSSFMDEVNQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGTLFGLDQDLNST
TNFTNDNYCFDATTSCAPAFRVLKQLIQRCLTDAVTSGNIFADAMLQHLYRWLCSPRSRL
HDPALHSMLHKVMQKMFALLVAELRKLGAAIVFASFSKIIIDTGKSDVSAARAYCDSVIK
TVQNRELFEWIELEPLQFWHSLLFMDQYNYGGIQARLSDGPLEVNSEPGEESVCGESQVD
IVSSWNIAENLPKATQDHFILIVSEFMYIPWKFAQEQATHRASSSDGDLCTPSITAALAE
TFDLQMAENLKKKIRTYFTDKLLKIVCDPNLQMKVMNNSQKTQETSDANSQSYSHVQKGD
PALEFIKHVCAVLALDQNVQHEVLIMRRNLLKLVRVREFAPEAEFHSLSVSYTLPNVICS
YCNDCRDLDLCRDRALISQEWRCAVPQCGQPYDREAMENALIQIVRQRERLYHLQDLVCL
KCHQIKAAHLADHCTCAGSFSCKEGVSEFCNKMQVFFNIAVNQKFQLLQECTSWILEAR
NT seq 6660 nt   +upstreamnt  +downstreamnt
atgaacggcggtggagataataggcgccgggactggcgagacaccacgaggatttcaaag
aagcagaaactcatccttagctccgaagaacaactcgaatgcaagctcggattcgatgtt
ttcaccgaaggagataaacgactcggctggcttctcactctggcctcttcttcatgggag
gatcaggagacccgcaaagtgtacagttgcgtcgatctttatttcgtttgtcaggatggt
tcaacattcaaagcgaagtataaattcaggccatatttttacgtggcaacaaaggataaa
atggaaatggatgtggaagcatatttgagaaggcgatatgaatctcaaattgcagacatt
gaaattttagagaaagaggatcttgatcttaaaaaccatctatctggcctacgcagattg
tatttaaaaatatcatttgatactgtccaacagttgatgcacgtgaagagggatctaaca
catattgttgagagaaaccaaacgaagtttgataccatagaagcatatgaatctatactg
acagggaaaagcaagcagcgaagtcaagattttatagattatatcactgatctacgtgaa
tatgatgtcccgtaccatgttcgctatgctattgacaacgatgttagatgtggccagtgg
tacgatgttagtgtatctagttctggggttatgttagagaagaggacggatctcttgcag
cgagctgaagttcatgtctgtgcctttgatatcgaaacaacgaagcttcctcttaagttt
cctgacgccgaatatgattccgtaatgatgatctcatacatggttgatggccaaggctat
ctcattattaacagagagtgtgttgcggaagatatagaggatatagagtacaccccaaaa
ccagagtatgaagggcactttaaagtaacaaatgtgaaaaatgaggaagggctccttaga
cactggtttgcacatatgcaagtggtgaaacccggcatctatgtaacatataatggtgac
ttctttgattggccatttttggagacaagagcaactcattttggcttgagtatgaaggat
gagcttggattttcttgtgacaagaatcaaggggaatgccgtgctaaatttgcttgccat
ctggattgttttgcttgggtcaaacgtgatagttatcttcctcaaggaagtcagggtctg
aaggctgttacgaaggccaagttgggttacgatcctctagaagttaatcctgaggatatg
gttcgctttgcaatggaaaaaccgcagatgatggcttcatattctgtttcagatgctgtt
tcaacttactacttgtatatgacttatgttcatcccttcattttctcccttgcaaccata
atacctatgccgccagatgaagtcttacgcaaaggaagtgggactttgtgtgaaatgctt
cttatggtccaggcttataaggcaaatgttatctgtccaaacaagcaccagtctgatcca
gagaagttttatggtagtcaactccttgagagtgagacttatattggtggtcatgtggaa
tgcctagaaagtggtgtattcagatccgaccttccaactagttttaagctcgacccgtct
gcctatgagctattgatcaacaaccttgatagagatctgcagtatgccattgtagttgag
gggaagatggatttggaatctgtcataaattatgatgaagtgaagaatgccgttatggaa
aagttaatgagattgcgagataatcctttaacggaagaatgtcccctcatatatcacctt
gatgtcgctgcaatgtatccaaacatcatattgacaaataggcttcagccaccatcaata
gtttcagatgagatatgcactgcatgcgactttaatcgtcctggcaaaaagtgtctccgg
aagcttgaatgggtttggcgtggtgaaacgtacatggcaaagagaagtgattattaccac
ataaagaggcagctcgagtctgaacttgtcgaagtaggagatggtcaacgatcacagtct
tttcttgatttgcctaaagcagatcaacaagcaaagctgaaggaccgcttaaagaaatat
tgtcaaaaggcatataaaagagtcctggaaaagccggtcacagaacttcgagaagcaggg
atctgcatgcgagaaaatcctttctatgttgacaccgtacggagtttccgagataggcga
tatgaatacaaagggcttaataaagcttggaagggtaagctgtctgaagcaaaggctagt
ggaaattccataaaaattcaagaagcacaggacatggtagttctgtacgattcattgcag
ctggctcataaatgcattttgaattccttttatggttatgtcatgcgaaagggtgcaagg
tggtactcaatggagatggctggagttgttacgtatacgggcgcaaaaatcattcagaat
gctcggttattggttgaaaaaattggaaaacccctcgaattagacacagatggtatctgg
tgtgcattaccaggctcttttcctgagaattatacattcaagacaaaagatccaaaaaag
aagctgacgatctcctatccttgtgttatgctgaatgttgatgtggcaagaaacaacacc
aatgatcagtaccagactctgaaggaccccatcaataagacgtatacaacacacagtgaa
tgctcaattgagtttgaagtcgatggaccatataaggcaatgattcttcctgcttccaag
gaagaaggtattctgattaagaagcgctatgcagttttcaacgatgatggtacgcttgct
gagcttaaaggttttgagattaaacgtagaggtgagctaaagctcatcaaagttttccag
gctgagctttttgataagttccttcatggatcaaccttagaggaatgctattcagtagtt
gcttcagttgcggatcggtggcttgacctgcttgataatcaaggcaatgatattgcggac
agtgagttgcttgattatatatctgaatcaagcacaatgagcaaatctctagccgattat
ggtgagcaaaagtcatgtgcggtaaccacagcaaaaaggcttgctgattttctgggggat
gcaatggtcaaagataaaggattgcgttgtcagtatattgttgcatgtgagccaaaggga
accccagtaagtgaacgtgctattcctgttgcaatatttgaaactaatgctgagatcatg
aggttctatgtcaaaaagtggtgcaaaatatcatcagaagttggaatacgttccattatt
gattggtcttattacaagcaacggcttagttcagcaatccagaagattatcacaattcct
gctgcaatgcagaaggtttcaaaccctgtgccaagggtggttcatcctgaatggctgcat
aagaaggttcgtgaaaaagaagacagatttcgccaacgaaaattaaatgatatcttcagc
tcagtgaacagagatgatgcagtgcccagtaaaaattctaaaaatcagcaaaatattgaa
gacctggaagactttagacacagcggtaaatcgtctatatttggtccgaggcctgttgta
catcgtcatggagtcaacaaagatcatccagtgaacactagtgatcaagtggacaatcaa
caacaaagtgttcatgctagcagtctatgcaagatgttaccttcacaagaaattgctgct
gtggaagatattgacaggaatgtagattatcatggatggctacagcaaaaaaagagaaaa
tggaaagagattcgtgaagggaggaaacgccaaaggttggatacttcaaggacagtaaac
catgttaatggcagtactgaattgtctcatcacacggtaaaccacaaacgccagggtagg
actggggttaattcctactttgagcgacatgaattagctctcacacgaagtcactggcag
atagttcagcttgaacctacttcacagcatggacaattttttgcatgggttgttgtggaa
ggagccatgcacaaaatttcagtaactatccccagagtgttttacctcaactccaaagct
cctataacagaggaatttcctggaagacgtgtcaacaagattcttcctcatggacgccat
agctacaatttaattgaggttattattgatgaggatcaattcaagtcagagagcaaaaag
ctagcagctcaccttgctgatcccgaagtggagggaatatatgaaacaaaggttccattg
gagttcagtgctattctccagatgggttgtgtttgtaaagttgataaagcagctaaaaaa
aggaatccacaagatggttggagtttgagcgagctgcatatgaagacaaccactgagtgc
ccgtatttggatcagtcaataactttcttctacttatatcacagcttgtccgatggacga
gccatttatgtgggatattttccttcgtccaagatgatacatgttgtggttgttaatcca
tttcaaaacaaggaattatcaccacacattcttgaaagacattattatgaagcttgccaa
acattgtctggtcagcctatcacacaaaaggaaggaattagttttaaggtggattatgtc
aagcacatcaaggaagcggagaggattctacagagaataataaatgagcataggcatcat
gggcctgcagttgccatgattgagtgcccggatgcccattcgctgaagtctggtatacga
gctttggatgattttccttgcatcagtatcccttgtaatgctcgggatagccaatatcag
gcactaggctggcaaaatgttgcagcaaagattggaatgcagcgatgtgttacatcctcc
cagtggttaaatgaaaggatcactctctcaagatatgcccatgttcccatagggaatttt
gatgttgattggctcatgcatacagcagatatcttcttttctagagcactgcgtgatcag
caacaggtcttgtggatatctgataatggcatccctgacttgggaggcgtaaatgatgaa
gtatcgtcttttatggatgaggtcaatcaaccggttcttacttacccgggtgcatataga
aaagttactgttgagctgaagattcatcatctggctgttgatgctcttctgaaaagcaac
caagtaaacgaaatggaaggaggcactttgtttggattggaccaggacttgaactctacc
acgaattttactaatgataattactgctttgacgcaacgacctcctgtgcacctgcattt
cgtgtactcaaacagttgatccagagatgccttacggatgcagtaacatcaggaaacata
tttgctgatgcaatgctgcaacatttgtatcgatggctctgcagcccccggtctagactg
catgacccagctctccacagtatgcttcacaaggttatgcaaaagatgtttgcattgctt
gtggctgaactccgaaaattgggtgctgctattgtgtttgccagcttctcaaaaattata
attgacactggaaagtcagatgtatctgcagccagagcctactgtgatagtgttattaaa
acagtacaaaatagagaattgtttgagtggattgaacttgagcccttgcagttttggcac
tcgttgcttttcatggatcagtacaattatgggggaatacaagctagacttagtgatggg
cctttagaagttaactcagaaccaggtgaagaaagcgtgtgtggtgaatcacaagtcgac
attgtgtcaagctggaacattgcagaaaatttaccaaaggcaactcaggatcatttcatt
ttgattgtttcggaatttatgtatattccatggaaattcgcacaagaacaagctacacat
cgagcatctagtagcgatggtgatttatgtacaccatcaatcactgctgcacttgctgaa
acatttgatttgcaaatggcggaaaatctaaagaagaagatccgaacttacttcactgac
aaacttctgaaaattgtttgtgaccctaatcttcaaatgaaagtgatgaacaactcccag
aagactcaggagacatcagatgcaaactcacaatcttatagccatgtccagaagggggat
ccagctttagagttcattaagcatgtctgtgcagttttggcccttgaccagaatgtgcag
catgaagttctgatcatgaggagaaatctattaaaacttgttcgtgtgagggaattcgct
ccagaagcagaatttcacagtctctctgtgtcgtatacccttccaaatgtcatttgcagt
tactgcaacgactgcagagaccttgacctgtgtcgagacagagctttgatttctcaggag
tggcgttgtgctgtgccccaatgtgggcaaccttatgatcgtgaagcaatggaaaatgct
cttattcaaattgtgcggcagagagagaggctataccatcttcaagatctggtttgccta
aaatgccaccagattaaagctgcacatttagcagaccactgtacttgtgccgggtcattt
agctgcaaggaaggtgtctcggagttctgcaataaaatgcaagtcttcttcaacatagct
gtaaatcaaaagtttcaattactccaagagtgcacttcttggattttggaagccagataa

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