Nicotiana attenuata (coyote tobacco): 109213306
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Entry
109213306 CDS
T05870
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109213306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109213306
Membrane trafficking [BR:
nau04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109213306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF4259
Motif
Other DBs
NCBI-GeneID:
109213306
NCBI-ProteinID:
XP_019232634
UniProt:
A0A1J6L2D9
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MIPNGVEDEEKWLAAGITGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEIFFKEESKRGCSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRSIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTAMDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGIDLDLYKDMVLP
RVLEQVVNCKDEIAQGYLMDCIIQVFPDEYHLQTLETLLDACPQFQPSVDIKTVLARLME
RLSNYAALSAEVLPEFFQVEAFTKLNNAIGKVIEAQEDMPIAGVVTLYASLLTFTLHVHP
DRLDYVDQILGACVQKLSGKGKLKDNKATKQIVALLSAPLEKYKDIDTVLKLSNYPHLME
YLDDATSKVMANVLVQNILKNKTCISTAEKVEALFELMKALIRDLDEDVNDELDEDDFKE
EQNSVARLIQMLHNDDPEEMLKMICAVHKHILTGGPKRLPCTIPPLILNSLKFVRRLHSH
DENAPEDEASAMPEKFFQILNQIIEALSIVPVPELALKLYLECAEAANESDLEPVAYEFF
TQAYMLYEEEISDSKAQVTAIHLIIGTLQRMHIFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDNIKDGERVLLCLKRALRIANAAQQMSTATRGSSGSVLLFIEILN
KYLYFFEKGVSQINVASIQSLIELITTEMQSENTTADPAADTYFASTLRYIQFQKDKGGA
VGEKYEPIRHQVIVK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatacctaacggagttgaagacgaagagaagtggcttgccgctgggatcaccggcctt
cagcagaacgcattctacatgcatcgcgctcttgactcgaacaatctgaaagatgcactg
aaatactcggctcagatgctctcggagcttcgaacttccaagctttctcctcacaaatac
tacgagctatatatgcgggcatttgatgaattgaggaagctagagattttcttcaaggag
gagagtaagcgtggttgctctattgttgacttgtatgagcttgtgcagcacgctggcaac
attttgcccagattgtatctcctttgtacagtggggtcggtgtacatcaaatcaaaggag
gctcctgccaaggatattctcaaagatctggtggaaatgtgccgtagcatacagcatccg
ttacgtgggctcttcctaaggagttacctttcccaagtcagtagggataaactgcctgat
ataggatctgaatatgaaggggatgctgacactgccatggatgctgtagaattcgtgctc
caaaatttcacagaaatgaacaaactttgggtgcgaatgcaacatcagggacctgcacgg
gaaaaggaaaaacgtgaaaaagaaaggagcgagcttcgcgatcttgtggggaaaaacctg
catgttctaagtcaaattgagggcattgaccttgatttgtacaaagatatggtgcttcca
agagttctagagcaggttgtcaactgtaaagatgagattgcacagggatatttgatggat
tgcatcatccaagtcttccctgatgagtaccacttacaaactcttgaaacattactagat
gcttgcccccagtttcagccatctgttgatatcaagacagtgcttgctcgtctgatggaa
aggctttcaaactatgctgctttaagtgcagaagtcttacctgagtttttccaggttgaa
gctttcacaaaactaaacaatgccataggcaaggtgatagaggctcaagaagacatgcct
attgctggagtggtgactttgtatgcatctcttttgacatttactcttcatgtccaccct
gatcgccttgattatgtagatcagattctgggtgcatgtgttcagaaactttctgggaaa
ggaaagctcaaagacaataaagcaacaaaacagattgtggccctactaagtgctcccctg
gagaagtataaggatatagatactgtgctaaagctgtcaaattatcctcatcttatggag
tatcttgatgatgcaactagtaaagtgatggctaatgttttggttcaaaatattttgaaa
aataagacttgcatttcaactgctgaaaaggttgaggcactttttgagttaatgaaagca
ctgattagagatttggatgaggatgttaatgatgagcttgatgaagatgatttcaaggaa
gagcagaattctgttgcacggcttattcaaatgcttcacaatgacgatcctgaagagatg
ctgaagatgatttgtgctgtgcataaacacattttgacaggaggaccaaagaggcttcct
tgtaccatccctccccttattcttaactctcttaagtttgttaggcgactgcatagtcat
gatgaaaatgctcctgaggatgaggcatctgctatgcctgagaaattttttcagatactc
aatcagattattgaggctctctcaattgttccagtacccgaactagcattgaagttgtac
ttggagtgtgctgaggctgctaatgaatctgacctagagcctgttgcctatgaatttttc
actcaagcttatatgctatatgaagaagaaatctcggactccaaagcacaggtgactgca
atacacttgataatagggactcttcagagaatgcacatctttggtgttgagaacagggat
acattaacgcacaaggccacggggtactctgcaaagctccttaagaagcctgatcaatgt
agggctgtatatgcttgttcacatcttttctgggttgacgatcaggacaatatcaaggat
ggagaaagggttttgctttgcttaaagcgggccttaaggattgcaaatgctgctcaacaa
atgtccactgcaacccgaggaagcagtggatcggtcttgctctttatagaaattctaaac
aagtatctatatttctttgagaagggggtctcgcagattaatgttgcctccatccagagc
ctgattgaactaatcacaactgaaatgcaaagcgaaaatacaacagcagatcctgcagca
gatacctactttgcaagcaccctgcgatatatccagttccagaaggataaaggcggtgca
gttggtgagaaatacgagcccatcaggcatcaagtcatagtcaaatag
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