Nicotiana attenuata (coyote tobacco): 109213497
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Entry
109213497 CDS
T05870
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109213497
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109213497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
109213497
NCBI-ProteinID:
XP_019232851
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MGKNKQLSLHILEVTMVALLFLLVADCRPQNGRRLTIMPDVKLEIQPNDVTISNGFVNVT
LSKPDGLITGISYGGINNILDTNLVETDRGYWISVWNLTGHGTARKQLSATSFEIISNNG
NTTEISFKRIWNSSQTDEPPLDFDRRIVMGRDTPGFYTYAMVERSKEYPPTIIQQLNVVF
KLQDMFHYMAVSDERQRVMPTQEDREKGKVLGFKEAVLLTNPANPDLKGEVDDKYFYAND
NINDKVHGWVCSNPPVGFWMINPSNEFRTGGPFKQDLTSHVGPTVLSVFFSTHYAGEDLA
IKFQHGESWKKVVGPVFVYLNSDASAKENPSVLWNDAKKRMNQEVASWPYEFPLSQDYIK
SNQRGTVTGQLFVNDWFTNKRDVPASNAYIGLAPPGDAGSWQIENKGYQFWTKTDSNGNF
IIKNVISGTYNLYATVPGFIGDYKYAPIVKVTPGSSIKLGSLVYKPPRNGATLWEIGVPD
RTAAEFFIPNPPPQYKVHKYQNNSESIFKQYGLWEQYSFLYPKRDLVYNVATSKYSRDWF
FAHVTRNVGNNKYEATTWSILFSLGNVNKASNYTLQLALAAAHESELHVRVNDEKAREPV
FTTGLIGGSNAIARHGIHGLYWLYSIGIQGNLLVKGPNTIFLTQTNADLTAFNGVLYDYL
RLEGPH
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaataagcaactaagcttacatattttggaggttactatggttgctttatta
ttcttgttagtggctgattgtcgtcctcaaaatgggcgaagattgacaataatgccagat
gtcaaattggagatacaacctaatgatgtaacaataagcaatggcttcgtcaatgttact
ttatcgaaaccagatggccttataacaggcatatcatatggtggtatcaataacatatta
gacactaaccttgtcgaaaccgatagagggtattggatctctgtttggaatcttacagga
catggaacagctcgaaaacagttatcagcaacaagttttgagatcatatcgaacaatgga
aacacgacagaaatttcatttaaaagaatttggaattcttctcaaactgatgaacctccc
ctagactttgacagaaggattgtcatgggacgcgacactccaggattttatacttatgct
atggttgaacgttcaaaagaatatccccctacgattatccaacaactcaatgttgtgttc
aagcttcaagacatgtttcattacatggctgtctcggatgagaggcaacgtgtcatgcca
acgcaagaggatcgagaaaaaggaaaggtgcttggctttaaagaagctgttctacttaca
aatccagccaatccagatctaaaaggagaggtggatgacaagtacttctacgcaaatgat
aacataaacgataaagttcatggatgggtatgtagtaatcctccagtaggattttggatg
attaatccaagcaatgaatttcgtactggaggaccttttaaacaagaccttacttcacat
gttggtccaactgtacttagtgtattttttagtacacattatgcaggagaagatttagca
attaaatttcaacatggagaatcatggaaaaaagtcgttggccctgtgtttgtgtatctt
aactctgatgcttcagctaaggaaaatccgtctgtactgtggaatgatgcgaagaaaaga
atgaatcaagaagttgcaagttggccttatgaatttccactttcacaagactacatcaaa
tctaaccaaagaggaacagttacaggccaactctttgttaatgactggtttactaataaa
agagatgtacctgcatccaatgcatatatagggttagcgccacctggagatgctggatca
tggcaaatagaaaataaaggttaccagttttggactaaaactgactctaatggaaatttc
atcataaaaaatgtcatatctggtacatataacttgtatgcaacagtcccaggatttatt
ggagattacaaatacgctccaattgttaaagttactccaggttctagtattaaattaggg
agtttggtgtataaacctccaagaaatggagccacactttgggaaattggagtgccagat
cgcacagctgctgaattctttattccaaatccacctccacaatataaagttcacaaatat
caaaacaactctgaatcaatatttaaacaatatggtctatgggaacaatacagtttttta
tatcctaaacgagatctcgtctacaatgtcgccactagcaagtattcaagagattggttt
ttcgctcatgtcacaaggaatgtaggaaacaacaaatatgaagctacaacatggagtatt
ttatttagccttggaaatgttaacaaggcctcaaattacactctccaattagctcttgca
gcagctcatgaatctgaactccatgttcgtgtcaacgatgaaaaagcgcgagaacctgta
tttacaacaggattaatagggggaagtaatgcaattgcaagacatggtatacatggatta
tattggctttacagcattggaatacaaggcaatttgcttgttaaaggaccaaacacaatt
tttcttactcaaacaaatgctgatctcactgcctttaatggagtcttgtatgattatctt
cgtttagaaggacctcattag
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