KEGG   Nicotiana attenuata (coyote tobacco): 109213530
Entry
109213530         CDS       T05870                                 
Name
(RefSeq) THO complex subunit 7A-like
  KO
K13176  THO complex subunit 7
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03013  Nucleocytoplasmic transport
nau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109213530
  09122 Translation
   03013 Nucleocytoplasmic transport
    109213530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109213530
   03041 Spliceosome [BR:nau03041]
    109213530
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109213530
Spliceosome [BR:nau03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109213530
SSDB
Motif
Pfam: THOC7 SAB SPATA1_C Viral_DNA_bp DUF6231 BRE1
Other DBs
NCBI-GeneID: 109213530
NCBI-ProteinID: XP_019232882
UniProt: A0A1J6L1Y3
LinkDB
Position
Unknown
AA seq 242 aa
MLIKGRKIAGKGETVASHYAFGQLEDEIIIKHRLLTRTTTTRGEPPLKKLQKKFTTFASE
IEKEADNYGDCERLAKAFLQELYTFEIPLLKSKTVIDANVREKENFNDLKGEINVQILQA
QADIEDLKRQLEESKVERKHKEEGEVIRKLIALQPPRSETQKVLTELEKEIAALEAENTA
NSRTLDLRKKQFALLLHVVDELQNTIEEEQRSLIEEMRNVVDDHNKSGVEDATVGPEAMA
VD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttgataaaaggtagaaaaattgctgggaagggggagacagtggcatcacattatgca
tttggacaacttgaagacgagataataattaagcatagacttctgactcggacaaccacc
actagaggtgaaccgccactgaagaaactccaaaagaagtttactacttttgcctcggag
atagagaaggaagctgataactacggagattgtgaaagacttgctaaagcattcttgcaa
gagctatatacgtttgagattccgctcctaaagagcaaaacagtaatagatgcgaatgtt
agagaaaaggagaatttcaacgacctgaaaggtgaaatcaacgtgcagattttacaggct
caggctgatatagaagatctcaagaggcaacttgaagaaagcaaggttgaaaggaagcat
aaagaagagggtgaggtgatcaggaagttgattgctttgcaacctccaagatcagaaact
cagaaggttttaacagagcttgagaaagagatagctgcgttggaagcagagaatactgct
aattcaaggacattggaccttcgtaaaaagcagtttgctcttttattgcatgtggttgat
gagttgcagaacacaatagaggaagagcagaggagtttgatcgaagagatgaggaatgta
gttgatgatcataacaagagtggagtggaggatgctactgtcggtcctgaagcaatggct
gtggattag

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