Nicotiana attenuata (coyote tobacco): 109213737
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Entry
109213737 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109213737 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109213737
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109213737
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
109213737
NCBI-ProteinID:
XP_019233116
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Position
2:80609829..80617074
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AA seq
677 aa
AA seq
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MGYWRRFKHMIKCSCACAVQTGACCHSGGPGKMSQIGVKLYIQDRHVMMDNGIVQVTLSN
PDGIVTGIRYNGVDNLLEVLNDESNRGYWDVVWNSLDGGRSGVFEVIKGTNFKVITETDD
QVEISFSRPWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHVGSPEWPAFSLGETRI
AFKLRKDKFHYMAVADNRQRFMPLPDDRLPARCQRLAYAEAVLLNNPVEPELRGEVDDKY
QYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSSHYA
GDDLTPKFAQGEAWKKVFGPVFIYVNSVMQGEDPVALWDDANIQMQVEVQSWPYCFPASE
DFPSADQRGNVSGRLLVQDKYVNDDYIPANGAYVGLAPPGEAGSWQKECKDYQFWATADN
DGYFSMNNIRPGDYNLYAWVPGFIGDYLYETPISITPGCSVDVDEIVYQPPRDGPTLWEI
GIPDRTAAEFFVPEPNPRFINKLFVNHPDRFRQYGLWERYSELYPKDDLVYVTGESDYSK
DWFFAQVPRRKEDGTYQGTTWQIRFKLDSVNQGGTYKLRIAIASATLAEVQVRVNDPNTN
RPLFSTGLIGRDNSIARHGIHGLYWLYNIDIQGNMLVQGDNTIYLGQPRNQSPFQGIMYD
YIRLEAPPEFPFCTVLK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgggttattggcgtcgtttcaaacacatgataaaatgctcatgcgcgtgcgctgtacaa
acaggagcttgttgtcatagtggaggtcctggaaaaatgtcccaaatcggagtgaagttg
tacattcaggatcgtcatgtgatgatggataatggcatagtccaagtcacgttatcgaat
ccggacggaattgtcactggaatacgctataatggcgtagataatctacttgaagtcctt
aatgatgaatccaatagagggtactgggacgttgtctggaattctctagatggtggaaga
agtggggtatttgaagtgatcaagggtacaaatttcaaggttataacagagacagacgat
caggttgagatatcattttcccgaccatgggatccctccctccaaggcaaacttgttccg
ctgaatattgacaaaaggtttattttgctccgtggctgctctggtttctactcctatgcc
atttatgagcatgttggttcacctgagtggcctgccttcagccttggtgaaactagaata
gcattcaagctccggaaagataagtttcactacatggctgtagcagacaataggcaaaga
ttcatgcctctaccagatgaccgattgcctgcaagatgccaacgccttgcctatgcagaa
gcggtcctactgaataatcctgtggagcccgagttaagaggagaggtcgatgacaaatac
cagtattcatgtgataataaagataacaaggtccacggctggatatctatggatccgcct
gtgggattctggcaaattactccgagtgatgaatttcgatccggtggacctgtcaaacag
aacctcacatcccatgttggtccaactaccctagctatgtttctaagctctcattacgct
ggggatgatctaacaccaaaatttgctcaaggcgaagcctggaagaaagtttttggcccg
gtttttatatatgttaattctgtaatgcaaggggaagatcctgttgctctatgggatgat
gccaacatacagatgcaggttgaagttcaaagctggccttactgttttccagcatcagaa
gattttccatcagcagaccaacggggcaatgttagtggtagacttttggttcaagacaag
tacgttaatgatgattatataccagcaaatggcgcttatgttgggcttgctccaccggga
gaagctggttcctggcaaaaagaatgcaaggactaccaattttgggctacagcagacaac
gacggatacttctccatgaacaatatacgtccaggggactacaatctttatgcatgggtc
cctggattcattggggactatttatatgagactccgatttccataactccaggttgtagt
gttgatgtcgatgaaatcgtatatcagcctccaagggatggccccacattatgggaaata
ggcattcctgatcgtacggctgcagaattttttgtccctgaacccaacccaagatttatc
aacaagcttttcgtcaatcatcctgataggtttaggcaatatggattgtgggaaagatac
tccgagctatacccgaaggatgacctggtgtatgtaaccggagaaagtgactatagcaaa
gactggttttttgctcaggttccaaggagaaaagaggatggcacatatcaaggaacaacg
tggcaaatcagatttaaacttgattcggtaaatcaaggaggaacttataaattgcgcatt
gcaattgcatctgcaactttagctgaagtgcaggttcgagtgaatgatccgaacacaaac
cggcctctattttcaacgggattgattggaagagataactcaattgctaggcatggaatt
catgggctatattggttgtacaatatagacatacagggaaatatgctagtgcagggagat
aacactatttacttaggccaaccaagaaaccaaagtcctttccaggggattatgtatgac
tatattcgtcttgaagctccaccagagttccctttttgtacagtgctcaagtaa
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