Nicotiana attenuata (coyote tobacco): 109213982
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Entry
109213982 CDS
T05870
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109213982
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109213982
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Pectate_lyase_3
NosD
Motif
Other DBs
NCBI-GeneID:
109213982
NCBI-ProteinID:
XP_019233379
UniProt:
A0A1J6L8N3
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MAFVSGNSVLLILLISLASLVPNLHAGIAEFDAYLEKQAKEALNSSLAAYNEHPEEITDT
FNREVGDTLLNITSLRRHLKEKSSCMATNPIDRCWRCDENWAKNRKKLADCARGFGHKTT
GGKAGRYYVVTDDSDDDVKDPKPGTLRHAVIQEEPLWIIFEKSMVIKLKEELMITSDKTI
DGRGVSIHIAYGAGLTIQFVHNVIVHNIRIHHIISTSGGMIRDSVKHIGIRTVSDGDGIS
IFGSNHIWIDHCTLSQCTDGLIDAIMASTAITISNCKFNHHNDVMLLGATDAFPQDSIMQ
VTVAFNRFGKGLIQRMPRCRWGFFHVVNNDYSHWQMYAIGGSANPTIISQGNRFKAANNP
NTKQVTKRDYAPESVWKNWQWVSEGDLFLNGAYFVESGPQNKKKSALTKPHRIKFKPGSY
AGRLTRYAGVRKCKIGTPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgttagtgggaattcagttttgttaatattgcttatatcgttagcttcatta
gtcccaaatttgcatgccggaattgctgaatttgatgcatatttggaaaagcaggctaag
gaagcgctcaactcttcccttgctgcatacaatgaacatcctgaagaaatcactgataca
ttcaatagagaagtcggagacacattgttaaatattacaagcttaaggaggcatctaaag
gaaaaaagtagttgcatggcaaccaatccaattgacagatgctggaggtgtgacgaaaac
tgggcaaaaaacaggaaaaagctagcagattgcgctcggggatttggccacaaaacaact
ggtggtaaagcaggaaggtactatgttgtaaccgatgactcggatgatgacgtgaaggat
ccaaagccggggacccttcgtcatgctgtgatccaagaggagccattgtggattatcttt
gagaagtcaatggtaattaagttgaaggaagaactgatgatcacaagtgacaagacgatc
gatggcaggggagtttctattcacattgcctatggcgctggtttaactatccaatttgtg
cataatgtcatagtccacaacattaggattcatcatattatatctacctcaggtggaatg
ataagagattctgttaagcatattggtattaggacagtgagtgatggagatggtatttcc
atttttggttccaaccatatttggattgaccattgcactttgtcccaatgtactgatggc
ctcattgatgccatcatggcttccactgcaatcaccatttctaactgcaaattcaatcat
cacaacgacgtgatgcttttgggggcaactgatgccttcccacaagattcaataatgcaa
gtcacagttgcattcaatcggttcggaaagggattgattcagaggatgccaaggtgcagg
tggggattcttccatgttgtcaacaatgactactctcattggcaaatgtatgcaattggt
ggcagtgctaatccaaccattatcagccagggtaatcgtttcaaggccgctaacaaccct
aacactaagcaggtaactaagagggattacgcgccagaatccgtgtggaagaactggcaa
tgggtatcagagggtgatttgttcttaaatggggcttactttgtggagtcagggccacaa
aacaagaaaaaatctgcattgactaaaccgcataggatcaagttcaagcctggttcatat
gcaggccgactcactcgctatgctggtgtgcgcaaatgcaaaatcggcacaccttgttaa
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