Nicotiana attenuata (coyote tobacco): 109214341
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Entry
109214341 CDS
T05870
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00730
Thiamine metabolism
nau01100
Metabolic pathways
nau01240
Biosynthesis of cofactors
Module
nau_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
109214341
Enzymes [BR:
nau01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
109214341
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
109214341
NCBI-ProteinID:
XP_019233796
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Position
2:complement(86910677..86915828)
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AA seq
657 aa
AA seq
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MHASSIILGRNMACVQTALTSLLCKNGNHHPQINFPSSSFLPGFDLTGQVAVTRKRETCV
NSFSGPKATLTFDPPSANKEKTKPKHTVDPNAPDFLPLPSFEECFPKSSKEYSEVIHEET
GHVLKVPFRRIHLSGDEPHFDTYDTSGPQGVNPRIGLPKLRKEWIDKREKLGGPRYTQMF
YAKQGIITEEMAYCAAREKMDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNA
NIGNSAVVSSIEEEVHKLQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQ
ALEKVNGIAENLSWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSI
HAKWCLAYHKENFAYEHWDDILDICNQYDISLSIGDGLRPGSIYDANDTAQFAELLTQGE
LTRRAWEKDVQVMNEGPGHVPMHKIPENMKKQLEWCNEAPFYTLGPLTTDIAPGYDHITS
AIGAANIGALGTALLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKGHPLSQAWDD
ALSKARFEFRWMDQFALSLDPVTALSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDIR
KYAETHGYGSAEEAILRGMDAMSAEFQAAKKTISGEQHGEVGGEIYLPENYINSLKS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcatcttctattattctggggagaaatatggcatgtgtccaaactgctttaaca
tcacttctgtgcaagaatgggaatcatcatccacaaataaattttccaagcagttccttc
ttgccagggtttgatttgacagggcaagttgctgttacgcggaaaagggagacatgtgtt
aattctttctccggccctaaagcaacattaacctttgatcctccaagtgctaacaaagag
aagacgaagccaaagcacacagttgatcctaatgctcctgatttcttgccacttccatca
tttgaagaatgcttccctaaaagctccaaagaatacagtgaagttattcatgaagaaaca
ggtcatgtgctcaaagtcccatttcgtcgtatccacctttctggggatgaaccacatttt
gacacttatgataccagtggtcctcagggtgtaaatcctcgtattggcctccccaagttg
cgcaaggagtggattgacaaaagggagaagttaggaggaccaaggtacactcaaatgttc
tatgctaagcagggaattataactgaggaaatggcttactgcgctgcacgtgaaaaaatg
gatccggagtttgtgagatcagaagttgctcggggccgtgcaatcatcccttcaaacaag
aagcaccttgagttggagcctatgatagtaggaagaaaattcttagtgaaagtcaatgcc
aacattggaaactctgctgttgtaagctcgatcgaagaagaagttcacaagcttcaatgg
gcaacaatgtggggtgcagatactattatggatctctctactggtcgtcacatccacgag
actcgtgagtggatcttacgtaattctgctgtaccagtgggcactgtgccaatctaccaa
gcattagaaaaagtaaatggcatcgctgagaatctgagttgggaagtttttagagagacc
ttaattgaacaagctgagcaaggtgttgattacttcacaattcatgctggagttcttctt
aggtacatcccattgacagcgaagcggatgactggaattgtttcgcgtggaggctccatt
catgcaaagtggtgcttagcttatcacaaggaaaattttgcatatgaacattgggatgat
atacttgacatctgtaatcagtacgatatatcgttatcaattggtgatggactgagacct
ggttcaatttatgatgcaaatgacactgctcagtttgctgaactcttgactcaaggagag
ctgactcgccgggcttgggaaaaggatgtacaggttatgaatgaagggcctggacacgtt
ccaatgcataagattcccgagaacatgaagaaacagctagagtggtgcaatgaagcaccg
ttttacactcttggacctttgacaactgatatagctcctggatatgatcatatcacctct
gccattggtgcagccaatataggcgcacttggaaccgcgctgctgtgttatgttactcca
aaagagcatcttggtttgcctaatcgggatgatgtgaagaccggagttatatcatacaag
attgctgctcatgcagctgatctagcgaaaggtcatccactttctcaggcttgggatgat
gcattgagcaaggcaagatttgagttccgatggatggatcaatttgctttgtcattggac
cccgtgactgcactgtctttccacgatgaaactttaccagccgatggtgctaaagtggca
catttctgctctatgtgtggccctaagttttgttctatgaaaataactgaagatataagg
aagtatgcagaaactcatggttatggaagcgcagaggaagccatactgcgcggcatggat
gctatgagtgcagagtttcaagctgcaaagaaaaccattagcggggaacaacatggcgag
gttggtggtgaaatctacttgccggaaaattacatcaactctttgaagagctaa
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