Nicotiana attenuata (coyote tobacco): 109214883
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Entry
109214883 CDS
T05870
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109214883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109214883
04121 Ubiquitin system [BR:
nau04121
]
109214883
03036 Chromosome and associated proteins [BR:
nau03036
]
109214883
03400 DNA repair and recombination proteins [BR:
nau03400
]
109214883
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109214883
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109214883
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109214883
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109214883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_6
PTCB-BRCT
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_10
RTT107_BRCT_5
Prok-RING_4
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
109214883
NCBI-ProteinID:
XP_019234394
UniProt:
A0A1J6JB20
LinkDB
All DBs
Position
2:91118732..91126961
Genome browser
AA seq
687 aa
AA seq
DB search
MAAETQSISRLLNPLAFHIQKLGLELKCPLCLNLLNKPMLLPCDHIFCNLCVPRSTQVQC
ECPVCKHHYVNQEIRAVPHVESMIAIFRSLDATFNAKVFQLKSPDAGWSSEQSPVSVNAD
DKLRNEQSVKVIVSSNDPNEEINRCNGHGIPWNGVNHLSLLPSSDRKADLKNERNIAEEI
DLNQLQQQSPGSSHSSDNNKDIVKETSELRVRNNDIKSHTAKMSIEDSSLVVEGPVHHTI
KHEHVFEERDVKRQKKLSYELSETVLQSHAIANSDCSIACKLSESSLVAQPKAVSNQHLP
KGSVCALCHTSKITEGTGPMLHYANGKEVVGDVTSLSKAIPVHMKCIDWAPQVYYDGDNL
RNLEAELARAAKLKCSGCGLKGAALGCLMKSCRRSYHMPCAFEIQDCRWDCDNFVMLCPS
HKSVKFPSEKSKSRKRASMEACPESAPITSERLNFWATSSDGPKEWVLCGSALSSEEKYM
MVKFANMCGATVCKTWNPNVTHVIAATDEKGACTRTLKVLMAILGGKWILTIDWIKACIG
ANCPVIEEPYEVSLDNHGCFGGPKAGRLRASSNAPKLFDGFKFYLSGDYVAAYKKDLLDL
VEKGGGSIIHTKEQLIYQIDSMNATNTSCLVVYNLDPPRGCMSGEDSNVLLHRQAEAEDL
AKQIGCQVIQHTWILQSIAACKLEPIC
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagactcaaagcatttctcggttactaaacccattggcatttcatattcag
aaattgggtcttgaactcaaatgccctctttgcttaaacttgctgaataaacctatgttg
cttccatgcgatcatattttctgcaacctttgtgttccaaggtctacccaagttcaatgt
gaatgccccgtatgcaaacatcattatgttaatcaagaaataagggcagtgcctcatgtg
gagagtatgatagccatatttagaagcttagatgctactttcaatgctaaagtctttcaa
ctcaaatctcctgatgctgggtggtcatcggaacaatctcctgtttctgttaatgctgat
gacaaattaagaaatgagcaatccgtcaaagtgatagtaagcagcaatgatccaaacgag
gagattaataggtgcaatggacatggaattccttggaatggtgtgaatcatctgagtctt
ttgccttcttctgacagaaaggcagacttgaaaaatgaaagaaatattgcagaggaaata
gatttgaatcaattgcaacaacaatcaccaggcagctctcattcatcagataacaacaaa
gatatagttaaagagacaagtgaattgagagtaagaaataatgatataaaaagccatact
gcaaagatgtccatagaagatagctcactcgtggttgaaggtccagtgcaccacacaatt
aagcatgaacatgtgtttgaggaaagagatgtgaagagacaaaagaaattaagctatgaa
ttgtcagagacggtcttgcaaagtcatgctattgccaactctgactgctctattgcatgt
aaattgagtgaatcttctttggttgctcagccaaaagcagtttcaaatcaacatctcccg
aaaggaagtgtttgtgctctctgccacacatctaagataacagagggaactggaccaatg
ctgcactatgcaaatggaaaggaggtggtgggagatgttacttcactttcaaaagccata
cctgtgcacatgaaatgtattgactgggcacctcaagtatattatgatggagataacttg
agaaatttggaggctgaattggcaagagctgcaaaactcaagtgtagtggctgtggccta
aagggtgcagcacttggctgcctcatgaagtcatgccgcaggagttatcatatgccttgt
gcatttgaaatccaagactgccgatgggattgtgacaactttgtaatgctctgcccgagt
cataaatctgttaaatttccaagtgagaagtcaaagtctaggaagcgtgccagtatggaa
gcatgtccagaatctgctcccataacatctgagcgattgaatttttgggcaacatcatca
gatggacccaaagaatgggttctatgtggatctgctctatcctcagaagagaagtatatg
atggtcaagtttgctaacatgtgcggcgcaactgtgtgcaagacttggaacccaaatgtc
acccatgtcattgcagcaacagatgaaaagggtgcatgcaccagaacactgaaagttctc
atggcaattttgggtggaaaatggatcctaacaattgattggataaaagcctgcattgga
gcaaattgtcctgtgattgaagaaccttatgaagttagcctggacaaccatggctgtttt
ggtggccctaaagctggtagacttagggcttcatccaatgcacctaaactttttgatggt
ttcaagttttatttgagtggagattatgtagcagcttacaaaaaggacctattagatcta
gttgaaaagggtggaggttccatcattcacactaaggaacagctgatttaccagattgat
tctatgaatgcaactaacacatcttgtctagttgtttataaccttgatccaccacgcggt
tgcatgtctggcgaagatagcaatgttttgctgcacagacaagctgaggctgaagatttg
gccaagcaaattggctgtcaggtcattcagcatacatggatcctgcagtctattgctgca
tgtaaattagaacctatctgctga
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