Nicotiana attenuata (coyote tobacco): 109215020
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Entry
109215020 CDS
T05870
Name
(RefSeq) RNA-binding protein 8A-like
KO
K12876
RNA-binding protein 8A
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03013
Nucleocytoplasmic transport
nau03015
mRNA surveillance pathway
nau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109215020
09122 Translation
03013 Nucleocytoplasmic transport
109215020
03015 mRNA surveillance pathway
109215020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109215020
03041 Spliceosome [BR:
nau03041
]
109215020
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109215020
Spliceosome [BR:
nau03041
]
Complex C
Other components
EJC/TREX
109215020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
YflT
Motif
Other DBs
NCBI-GeneID:
109215020
NCBI-ProteinID:
XP_019234563
UniProt:
A0A1J6KYF8
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MANAEVEAVDFEPEDDDLMDEDVDASSSPRATIPKLKSAITGGSSSAPKKTKGRGFREEA
AEADRNARMSARFDSLDSDGGPGPERSIEGWIVLVTGVNEETQEDDLHNEFGEFGEIKNV
HLNLDRRTGFVKGYALIEYENFEEAQRAINEKDGAEFLTQTIHVDWAFSRGPFKRRNARR
RSPRGHRSRSPRRRF
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgcggaggtagaggcggtggatttcgagccagaggatgatgatctgatggac
gaggacgtggatgcctcctcctctcctagggctacaatccctaagctcaaatctgccatc
actggcggctcttcctccgcacctaagaaaaccaaaggacgtggattccgtgaagaagcc
gctgaggctgaccgtaatgcccgtatgtctgcccgcttcgattcgctcgattctgacggt
ggtcctggtcctgaacgatccattgaaggatggattgttttagttaccggggttaatgaa
gagacacaagaagatgatcttcataatgagtttggtgagttcggagaaatcaagaatgtg
catttgaatctggatcgtcggactggatttgtcaagggctatgcattgatagaatatgag
aattttgaagaagcacaaagagctataaacgaaaaggatggagccgagtttctcactcag
actatacatgttgattgggcgttcagcagaggtcctttcaagaggaggaatgctaggagg
agatcaccgcgtggccatcgttctagaagtcccaggcggagattctaa
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