Nicotiana attenuata (coyote tobacco): 109215113
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Entry
109215113 CDS
T05870
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109215113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109215113
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
109215113
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109215113
Multi subunit type E3
ERAD complex
109215113
LMBR1L-GP78-UBAC2 complex
109215113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
CUE
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-RING_16
zf-C3HC4_4
PHD
E3_UbLigase_EDD
RINGv
zf-RING_Vps41
Kazal_1
zf-HC5HC2H
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
109215113
NCBI-ProteinID:
XP_019234678
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MGVSYLSISAFCTALSYVGLQCWMGISVQKLKSDGFIGESIINFGNESRALETLLGSQTT
IALGANFAVNIFILLVLCLKTIFFGDLHSPEIRKLVERLINYVISKGTFLPLVVPPTLYQ
AGLWSTWLVVLCFLKMFQALARDRLERLNASPSATPWTYFRVYSALLLVFSANLLWMRGC
LVVYRTTSSSLFLLLFFEPLSIAFETLQAILVHGFQLLDIYIHDSANDISNSRISKLFDI
SAAGSFGEWKGILIRNMGFLLDMMTLLMALAHYVHIWWLHGMAFHLVDAVLFLNIRALLS
AIVKRVKGFIKLRIALGTLHGALPDATLEELQTYDDECAICREPMAKAKKLSCNHLFHLS
CLRSWLDQGLTENYSCPTCRKPLFIGRSENEVNPHTADVQGDELLAREMSMGLDRLNLPG
HALPNEVSRNQTHNPLESSDWRGSGIDSGWLGLDDAGPSTGIRSGGLGRVQTVMRHLAAV
GETYAQTALEDAAWNLWSMRASQAGTSSSAIPPAGNVRHVGGSGGLHLRTPSRATNNNVS
NIYTMVETVREVLPHIPDEIILEDLQRTHSVTVTVNNLLHM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtaagttacttgtcaatttcagcattctgcactgctctgagctatgttggactc
cagtgttggatgggaatttcagttcagaaactaaaatcagatgggttcattggggagagt
attatcaactttgggaatgaaagccgtgcattagagactcttttaggttcacagaccaca
attgctttgggagccaattttgcagttaacatatttatcctactggttttgtgtcttaag
acaatattctttggagatttgcactcgccagaaatacgaaagctggttgagcgcctcatc
aattatgttatttccaagggaacttttcttccattggtagttccaccaacgctgtatcaa
gcaggcctatggtcaacgtggcttgttgttctttgctttctaaagatgtttcaagcttta
gctagggatcgacttgaacgactgaatgcctctccttcagctactccctggacatacttc
cgtgtgtattctgccttattgctggttttctcagccaacttactctggatgagggggtgc
ctggttgtatatagaacaacaagttcatccctgtttttgttattgttctttgagcctctt
agcattgcatttgagacacttcaggctattcttgttcatggattccagttgctcgacata
tatatccacgactcggcaaatgatatttcaaatagccgaatatccaagctctttgacata
tctgctgcaggctcatttggggaatggaaaggcattcttattcggaatatgggttttctc
ctagacatgatgactctgttgatggctctcgctcattatgtgcacatttggtggctccat
ggcatggcatttcacctagtggatgcagttcttttcctaaatatccgtgctttattgagt
gctattgtaaaacgtgtcaaagggttcattaaactgagaatagcattgggcacgctccat
ggtgcacttcctgatgcaactttggaagagctacagacttatgatgatgaatgcgctatt
tgtagggaaccaatggcaaaggcgaaaaaactatcttgtaatcatcttttccatctttca
tgcttgagatcttggttagatcaaggcttaactgaaaactattcatgtcccacttgccgg
aagccgttgtttataggcagaagcgagaatgaggtaaatcctcatactgcagatgttcag
ggtgacgagctgcttgctcgtgagatgagtatggggcttgatcggctgaatcttcctggt
catgcacttccaaatgaagtttcccgcaatcaaacgcacaaccctcttgaaagcagtgat
tggaggggttcgggaattgattcaggttggttgggcttagatgatgctggaccatctaca
ggcatcagatcagggggactgggtcgagttcagacagtgatgaggcatcttgcagctgtt
ggagaaacatacgcacaaactgctctagaagatgctgcctggaacctttggtctatgcgt
gcctcccaagctggtacttccagttcagcaatccctcccgcaggtaatgtgaggcacgtc
ggaggttctggagggttgcacttgaggacaccctcacgtgccacaaacaacaatgtatcc
aacatatatacaatggttgaaactgttagagaagtgctgccacacatacctgatgaaatt
attcttgaggatttacaacgaactcactcggtgactgttactgtgaataatcttctgcac
atgtga
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integrated database retrieval system
