Nicotiana attenuata (coyote tobacco): 109215325
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Entry
109215325 CDS
T05870
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109215325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109215325
03036 Chromosome and associated proteins [BR:
nau03036
]
109215325
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109215325
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109215325
PBAF complex
109215325
GBAF(ncBAF) complex
109215325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109215325
NCBI-ProteinID:
XP_019234911
UniProt:
A0A1J6KNH8
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSVNNNNNPNKNMGGSSSFGNSPPSNPIAHLQSQSQPQQQMPAGFPGSFQLSQLTAAHAQ
AIAQAQSKVQAHAQAQAQAAHAQFQAQLQAQGLSLNQAHALGNFGSASASAKRMPQKPPV
RPPAFAAANTVSPMRTMELSSAARRKKQKLPEKHLHEKVAAILPESALYTQLLEFESRVD
SALARKKVDIQEALKNPPTIQKTLRIYVFNTFANQIRTVPKKPNAEPPTWTLKIVGRILE
EGMDPDQAAMFQKSSSMYPKFSTFFKRVTISLDQKLYPDNHIIIWDSARSPAPQDGFEVK
RKGEQEFTVNLRLELNYMPEKYKLSPALTEVLGIEVETRARIISSIWHYVKARKLQNPDD
PSYFNCDPPLQKVFGEGKVKFTAVTQKITPHLSPPQPIHLEHRIKLSGNNPAGTACYDVL
VDVPFPIQRELNALLANTEKTKEIEACDEAICGAIRKIHEHRRRRAFFLGFSQSPIEFIN
ALLESQTKDLKVVAGEASRNAEKERRSQFYSQPWVEDAVIRYLNRKPASDAPGSG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttaacaacaacaataaccctaacaagaacatgggaggttcatcctcctttggc
aattcacctccttcaaacccaattgcacacctacaatcccagtcacaaccccaacaacag
atgcccgccgggtttcccgggtcatttcagttatctcagctcactgcagcacatgcccaa
gccattgctcaagcacagtctaaagtccaagctcatgctcaagctcaagcacaagctgcc
catgcccaatttcaggcccaattacaagctcagggtctgtcccttaaccaagcccatgct
cttggcaattttggttctgcaagtgcctccgcgaaacgcatgcctcagaaacctccggtg
cgcccacctgcattcgcggctgctaacacggtgtccccaatgagaactatggagctttca
tctgctgcgagaaggaaaaagcagaagcttcccgagaagcacttgcacgagaaggtggct
gcgattttgcccgaatctgcactttatactcagctccttgagtttgaatctcgggttgat
tctgccttagcaagaaagaaagttgacatccaagaggcattgaagaatccacctactatt
cagaagacgcttcgtatatatgtgtttaatacttttgctaatcagattcgtactgttcct
aagaagccgaatgctgaaccgcctacgtggacccttaaaatcgtaggaaggattttggag
gagggaatggatcctgatcaagctgccatgtttcagaaatcgagctccatgtatccaaag
ttttcgactttcttcaaaagagtcaccatttccttggaccagaaactgtatcctgataac
catattataatctgggattctgcaagatcgcctgcaccacaggatggtttcgaggtcaaa
agaaaaggagagcaagaattcactgttaatttaagactagaattgaattacatgcctgag
aaatataaactttcaccggctttaactgaagttcttggtatcgaggttgagactcgtgca
agaattatctcttctatctggcattatgttaaggctcgaaagttgcagaaccctgacgat
ccttcttactttaactgtgatcctccgcttcagaaagtgtttggggaaggaaaggttaag
ttcactgcggtcacacaaaagatcacgccccatttgtctcccccacaacccatacatttg
gaacacaggattaaactttccggaaataatcctgctggaactgcgtgctatgatgtattg
gttgatgtgccattccctatccagagggaactgaatgctctgctggccaatacagagaag
accaaagagattgaagcttgtgatgaagcaatttgtggtgccataaggaagatccatgag
catcggaggagaagggctttttttcttggttttagtcaatctcctattgagtttattaat
gcgcttctagagtcccagaccaaggatctgaaagttgtagcaggagaggcaagtcgcaat
gctgagaaagagcgacggtctcagttttatagccaaccatgggttgaggatgctgttatt
cgctacctgaatcgcaagccagcttctgatgcccctggaagcgggtga
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