KEGG   Nicotiana attenuata (coyote tobacco): 109215341
Entry
109215341         CDS       T05870                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109215341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nau03000]
    109215341
   03021 Transcription machinery [BR:nau03021]
    109215341
Transcription factors [BR:nau03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    109215341
Transcription machinery [BR:nau03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109215341
  RNA polymerase III system
    TFIIIB
     109215341
  RNA polymerase I system
    SL1/TIF-1B
     109215341
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 109215341
NCBI-ProteinID: XP_019234928
LinkDB
Position
Unknown
AA seq 200 aa
MADQGLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcagatcagggattggaagggagccaaccagtggatctcaccaagcacccttctgga
atagtccctactctccagaatattgtgtcaacagtgaatctggactgcaagttggacctt
aaagccattgcccttcaagctcgaaatgcagagtacaatccaaagcgttttgctgcagtg
atcatgagaattagagaaccaaaaactacagcattgatttttgcttctgggaagatggtc
tgtactggagccaaaagtgaacaacagtcaaagttggcagcacggaaatatgctagaatc
attcaaaagcttggttttccagccaagtttaaggattttaagatccagaatatagttggt
tcttgtgatgttaaatttcctattcgacttgaaggccttgcatatgcccacggtgctttc
tcaagttacgagccagaactattccctggattaatatatcgcatgaaacaaccaaaaata
gtgctgcttatatttgtttctgggaaaattgtcatcacaggagccaaggttagagatgaa
acatatactgcctttgagaacatatacccagttcttactgagttcaggaagaatcagcaa
tga

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