Nicotiana attenuata (coyote tobacco): 109215341
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Entry
109215341 CDS
T05870
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109215341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nau03000
]
109215341
03021 Transcription machinery [BR:
nau03021
]
109215341
Transcription factors [BR:
nau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
109215341
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109215341
RNA polymerase III system
TFIIIB
109215341
RNA polymerase I system
SL1/TIF-1B
109215341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
109215341
NCBI-ProteinID:
XP_019234928
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MADQGLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcagggattggaagggagccaaccagtggatctcaccaagcacccttctgga
atagtccctactctccagaatattgtgtcaacagtgaatctggactgcaagttggacctt
aaagccattgcccttcaagctcgaaatgcagagtacaatccaaagcgttttgctgcagtg
atcatgagaattagagaaccaaaaactacagcattgatttttgcttctgggaagatggtc
tgtactggagccaaaagtgaacaacagtcaaagttggcagcacggaaatatgctagaatc
attcaaaagcttggttttccagccaagtttaaggattttaagatccagaatatagttggt
tcttgtgatgttaaatttcctattcgacttgaaggccttgcatatgcccacggtgctttc
tcaagttacgagccagaactattccctggattaatatatcgcatgaaacaaccaaaaata
gtgctgcttatatttgtttctgggaaaattgtcatcacaggagccaaggttagagatgaa
acatatactgcctttgagaacatatacccagttcttactgagttcaggaagaatcagcaa
tga
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integrated database retrieval system