KEGG   Nicotiana attenuata (coyote tobacco): 109215349
Entry
109215349         CDS       T05870                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109215349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nau03041]
    109215349
Spliceosome [BR:nau03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109215349
 Complex B
    109215349
 Complex C
   U2 SnRNP specific factors
    109215349
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin DUF2849
Other DBs
NCBI-GeneID: 109215349
NCBI-ProteinID: XP_019234941
UniProt: A0A1J6IQJ8
LinkDB
Position
2:93884835..93897180
AA seq 808 aa
MLSTTPILPLPAPPLDGNLGPTPSAQVVEEPKDDNMEENEEDNNKANNVPASVATHTRTI
GIIYPPPDIRSIVDKTAQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAE
ARAQNQTSGEQPIQPAEQEAAPAPPTADGAEATARPDPSAQFRPVRRVLEPPEAEQYTVR
LPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNLQFHFLKPTHSMFMFFTSLADA
YSKVLMPPKGLTDKLRKSAVDMTTVLERCLHRLEWEKSQEQARQKAEDEIEQERLQMAMI
DWHDFVVVETIDFADDEDQDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDEEEV
QLVEEGMRAATLQENGGVKSAETMAIPEEQDPPMRIVKNWKRPEERIPTERDPTKYVVSP
ITGELIPINEMSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTRPDI
FGTTEEEVSNAVKAEIEKKKEEPKQVIWDGHTGSIGRTASQAMSQNINADDQNDAANDGR
NLPGPQAPPPPRPGFPSVRPLPPPPGLALNIPRPPNTVQYSTSTSAGVAAPPPPRPPMVN
MIPQVRSPPPPMPQMLGQQNLMVNRPPMPPSMAMNSHGHPIPPPPGSQFTPLGAPRPFVP
LPMSQPGMSMVPPPPIPQGMPPPPPPEEAPPLPEEPEPKRQKLDESVLIPEEQFLAQHSG
PARLNVSVPNTDEGNLKGQVLEITVQSLSETIASLKEKISGEVQLPANKQKLSGKAGFLK
DNLSLAYYNIASGETLSLSLRERGGRKR
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgctgagcaccacgccaatattaccccttccagcgcccccgttggatgggaatctggga
ccaacaccttcagcgcaggtggtagaggaaccaaaggatgataacatggaggaaaatgaa
gaggacaacaataaagccaataatgttccagcgtctgttgcaacacatactagaaccatt
ggtatcatttatccgcctccagatattaggagtattgtcgacaagactgcacagtttgtg
gcgaagaatggtccagaatttgagaagaggattgttctaaataacgctggcaatgcaaaa
tttaacttcctgaatgcttctgatccttaccatgcctattatcagcaccgtttggctgaa
gctcgtgcacagaatcagacttctggagagcagcctattcaaccagcagagcaagaagca
gcccctgctcctcctaccgctgatggtgctgaggcaactgctaggcctgatccgtcagct
cagtttagacctgtcagaagggttcttgagccacctgaggcagagcaatatactgttaga
ctccctgaagggatcacaggtgaagaattggatatcattaagcttacagcacaatttgtg
gccagaaatgggaagtctttcttaacagggttgacgagcagggagattaataatctgcag
tttcattttctaaagcctactcacagcatgttcatgtttttcacttcacttgcggatgcg
tattcgaaagttctgatgcctcctaaaggcttgacggataagctgcggaagagtgctgtt
gacatgacaacagtcctggagcgatgtctgcatcgattggagtgggaaaagtcacaggag
caggctaggcagaaagctgaagatgagatagaacaggagaggttgcagatggctatgatt
gattggcatgattttgttgtcgttgagactatagattttgctgatgatgaggatcaggat
ttacccccacctatgacccttgaggaggttataaggaggagcaagatgcctacattggag
gaagaagagtatgttgagcccggaaaagaggtggaaatggagatggatgaagaagaggtg
cagctagtggaagaaggtatgagagctgcgactcttcaagagaatggtggtgtcaagagt
gcggaaaccatggcaattccagaggaacaggacccacctatgcggattgtgaagaactgg
aagaggcctgaagagaggatccccacagaaagggacccaactaagtatgttgtctctcct
ataactggtgagctaatacctattaatgaaatgtctgaacatatgaggatctctctcatc
gatccgaagtacaaggaacagaaagacaggatgtttgcgaagattaaggagacaactctt
gcgcaggatgatgagatatctaggaacattgttggacttgcaagaacccgcccggatata
tttggtactacagaagaagaagtttcaaatgcggtcaaggctgagattgagaaaaaaaag
gaagagccgaagcaggtcatatgggatggtcacacaggtagcattggtcgcactgcaagc
caggcaatgtctcagaacattaatgcagatgatcagaatgatgctgcaaatgatggaaga
aaccttcctggtccgcaggctcctccacctcccaggcctggttttccatctgttaggcca
ttacctccacctcctgggcttgcgctgaatattcctaggcctcctaatacagttcagtat
tccacctccaccagtgctggggttgctgctccgcctccacctcgacctcctatggttaac
atgattcctcaggttcggtccccacctcctcccatgccacagatgctaggtcagcaaaat
ctgatggtaaatcgtccaccaatgcctccatcaatggccatgaattcgcatggccatcct
attccaccacctcctggatcacagtttacacctttgggagcacctcgaccctttgttccc
ctcccgatgtcccagcccggaatgtctatggttccacctcctcctattccccaaggaatg
ccgcctcctcctccaccagaagaagcccctcctctacctgaagagccagagccgaagagg
caaaagcttgatgagtcggttctcattcctgaagagcagtttttggctcagcactcgggt
cctgcaaggctcaatgtatctgtgccgaataccgacgaagggaatctcaaaggacaagtt
ctggaaatcacagtgcaatctctgtctgaaaccattgccagtctaaaagagaagatttct
ggggaggtccagcttcctgcaaacaaacaaaagctgagtggaaaggctggttttctcaag
gacaacttgtctcttgcatactataatattgcatctggagaaactctcagtctctctctg
agagaacgtggtggcagaaaaagatga

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