Nicotiana attenuata (coyote tobacco): 109215396
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Entry
109215396 CDS
T05870
Name
(RefSeq) BRCT domain-containing protein At4g02110-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109215396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109215396
03400 DNA repair and recombination proteins [BR:
nau03400
]
109215396
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
109215396
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109215396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
109215396
NCBI-ProteinID:
XP_019235007
UniProt:
A0A1J6JJ54
LinkDB
All DBs
Position
2:94408030..94419020
Genome browser
AA seq
1411 aa
AA seq
DB search
MTEGNQDMLYEDGSKIFIGVRFVLVGSDPLRKWQIRSKLLEGGAVDVSGYGPDCTHLIVD
SIVYDDPICLAARQDGKIIVTSLWVEHSYDMGMALDHHSIMYIPPRDLNGIPGAKSLVVC
LTGYPGHDRDDIMKMVGLMGANFSKPLVANKVTHLICYKFEGDKYELAKKTKTIKFVNHH
WLEDCLRSWEILPEDDYDKSGYELMMMEAEAKDSEEENEGIAANRRGEEIAIMGPDHSKS
PNQFLVKQEASTNISDLRTFRGLSGLGNTKELSLSASKQSKSHQVPAFEESPNRHAKMLN
TNLCRTKEELPSSIEQNGSDFVFVSSSARKSPHSCSSREIPRKFNLPMTSEQIKTYAGSP
ATAEAGTEFDFLNLSSEKDQEKSELGAKTSKNLSFPGKGQSSRLPEKRPLGISDSSFQSS
RTSNNPESIQDGYLTANRTEQLVHTSKLHSPRKIGCHLSSRNTAPHYDKGVTLHTYHDST
ISNPVTLSTQRGCDEDEPQSGTSRIMDSKGISHATVDVNGPLDELYDVPSSITERRDTLK
SNVLAGFDKAGDDSVSGSKPLRKRLLSKKTPTSDVNGPLDELHDVPSPVNERRDTLKSNV
LAEFNKAGDDSMSGSKPMKKRSLSKKTLGSRQSFRKGGDRNQKGSLSISKTTLMSDSAAS
SSGGREETEHQNNLSSTNGEVLPANNADSSKENERNIFLNSEKGTAKTNESINDDTEAPE
DQDDEELNGLKEKSTDTEAQRSRLRSMEKKLNENKVVNQDDMKDTDVAKRQSTENNKSET
QKILSDKKTKLSESTSVGKVSVEKVSSGPNYLMKNSKKTNLATKIALVSKEGAEGKKCRT
DGKKADAKKAKGSPSEKGEVLPADLSKEIERNKILDSEKETAKTTESINDDTEAPEDQED
EELNVLREKSSVTEVQHSRLRSMEKRLNVNKVVNQNDMKDTDIAKTQSIENNTSDTPKTL
SGKKTKLSESTSVGKASEEKVSKGPKHLMKNSKKTNLATKRVAVSTEGAERKKCRTDKAN
AKKGKGPPSETGKTTVIATEHQYERSMDVEKENIPDIGDQNASHNKHGADRSSPYDKKLC
SLQVTEVQSEPRWFIVSGHRLQRKEFQQVIKRLKGKVCRDSHQWSYQATHFIVPAPLRRT
EKFFAAASSGRWILKTDYLTACVEAGKFLDEEPYEWHNKGLTEDLAINLEAPRKWRLLRE
RTGHGALYGMRIIIYGDYIVPPLDTLKRAVKAGDGIILATSPPYSRFLESGVDFAIVSDV
MPRCDKWVQEFLRHEIPCVLPDYLVTYVCKPGYPLNNYVQYNTHAWAERALKKHVNRLEE
IVEEMVPSNDNKNDLACQVCGLPDREEVMLICGDESGSHGCGIGMHVDCCDPPLECVPEE
DWFCPECTKTRSNTSIKRKSKKGTSTSKRKK
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaggcaaccaagatatgttatacgaagacggctccaaaattttcattggtgtt
cgatttgttcttgtcggatccgacccccttagaaaatggcagattcggtcgaagcttttg
gagggtggtgcagttgatgtaagcggatatggaccagattgcacccatcttattgtcgat
agtattgtctatgatgaccccatatgtttagctgctcgacaggatgggaaaataattgtt
accagcttgtgggttgagcacagttatgacatgggaatggctttggatcaccattctata
atgtacatacctccaagggatttgaatggaatcccgggtgctaaatcactggtggtctgc
ttaactggatatcccgggcatgatcgagatgatattatgaaaatggtgggcctgatgggt
gcaaacttttcaaagccattggtggctaacaaagtcactcatctcatatgctacaaattt
gagggggataaatatgagcttgccaagaaaacgaagacgataaagtttgttaatcaccac
tggttggaggattgtttaaggtcttgggaaatccttccagaggatgattatgataagagt
gggtatgagttgatgatgatggaagctgaagccaaagattctgaagaagaaaatgagggc
attgctgcaaataggcgcggagaggaaatagctatcatgggtcctgatcattcaaaaagt
cctaatcaattccttgtgaagcaagaagcctctacaaacatttcagacttacgcacattt
agaggtttgtcaggtctgggaaacactaaggagctgtcattatctgcttcgaagcagtca
aaatctcatcaggttccagcctttgaagaatctcccaacaggcatgctaagatgcttaat
accaacttgtgtaggacaaaggaagagctgccatctagcattgaacaaaatggaagtgat
tttgtttttgtttcaagtagtgccaggaaatcccctcattcttgttcgtcccgagaaatc
cctaggaaattcaaccttcccatgacctcagaacaaattaagacttacgcaggaagtcct
gctactgctgaagcaggtacagaatttgatttccttaacctgtcctcagagaaggatcaa
gagaaaagtgagttaggtgcaaaaacttcaaagaacttgtcatttcctgggaagggtcaa
agcagtagactgcccgagaaaaggccgttgggcatttcagatagtagcttccagtcatca
aggactagtaataatccagaaagcatacaagatggttacttgacggcaaatcgtactgaa
cagttagtacacacgtcaaagttacatagtccacgcaaaataggctgtcatctatcatct
aggaacactgcccctcactatgacaagggtgtaactctgcatacttatcatgattctacc
atttccaatcctgtgacactaagcactcagcgagggtgtgatgaggatgaacctcaaagt
ggcacttctaggatcatggattcaaaagggattagtcatgccactgttgatgttaatggg
ccattggatgaactatatgatgtcccatcttccattactgaaagaagagataccctgaag
tctaatgtgctggcggggttcgataaggctggagatgattcagtgtcagggtctaagcca
ttgaggaaaagattgctctccaagaagacacccacctctgatgttaacgggccattagat
gaactgcatgatgtcccttctccagttaatgaaagaagagataccctgaagtctaatgtg
ctggctgagtttaataaggctggagatgattctatgtcagggtctaaaccaatgaagaaa
cgatcgctttccaagaagacactgggatctagacaaagtttccgtaaagggggtgatagg
aatcagaaagggtctttatccattagcaagactactctgatgtctgattcagctgcttcc
agtagcggagggagagaggagacagagcatcaaaataacttaagctctacaaacggtgag
gttctccctgcaaataatgcagattcaagcaaagagaatgagagaaatatatttttgaat
tctgaaaaaggaactgccaaaacaaatgaatccataaatgatgatactgaggctcctgag
gaccaagatgatgaggagttaaacggtttaaaagagaagtctactgatactgaagcgcaa
cgttctaggcttcgatcaatggagaagaaattaaatgaaaacaaggtggtaaatcaggat
gatatgaaggatactgatgttgcaaagagacaaagtactgaaaacaacaaatctgaaact
caaaagattctttccgacaagaagaccaagttaagtgaatcaacttctgtggggaaagtt
tcagtggagaaagtttccagtggcccaaattatctgatgaagaatagcaagaaaactaat
cttgctactaaaatagctctggtttctaaagaaggagcagaagggaagaagtgcagaact
gatggaaagaaggcagatgcaaaaaaagcaaaagggtctccatctgaaaagggcgaggtt
ctgcctgcagatttgagcaaagagattgagagaaataaaattttggattctgaaaaagaa
actgccaaaactactgaatccataaatgatgatactgaggctccagaggatcaagaagat
gaggagttaaatgttctaagagagaagtcttctgttactgaagtgcagcattctaggctt
cgatcaatggagaagagattaaatgtgaataaggttgtaaatcagaatgatatgaaggat
actgatattgcaaagacacaaagtattgaaaacaacacatctgatactccaaagactctt
tctggcaagaagaccaagttaagtgaatcaacttctgtggggaaagcttcagaggagaaa
gtttccaaaggtccaaaacatctgatgaagaatagcaagaaaactaatctagctactaaa
agagttgcggtttctacagaaggtgcagaaaggaagaagtgcagaactgataaggcaaat
gcaaaaaagggaaaagggcctccatctgaaacaggtaaaaccacagtaattgcaacagag
catcaatatgagagatccatggatgtggaaaaggagaatatacctgatattggagaccag
aacgcgagtcataacaaacatggggctgacagaagttctccttacgacaaaaaactttgc
tcattgcaggttacagaagtacaaagtgagccaaggtggtttatagttagtgggcatcgg
ctacagagaaaggagtttcagcaagttatcaagcgattgaaaggaaaagtgtgcagagat
tctcaccagtggtcatatcaggcaacacatttcattgtccctgctccattgcgaagaaca
gagaaattttttgctgctgcatcctctggaaggtggatcctcaagacagattatttaact
gcttgcgttgaggctggaaaattcttagatgaggagccatatgaatggcacaataaggga
ttgactgaagacttagctatcaacttagaggccccaagaaagtggagacttctgagggag
aggactggacatggcgcattatatgggatgaggataatcatatacggagactacattgta
ccaccattggatacattgaagcgagcagtcaaggctggagatggcattatattagcaact
tctcctccatacagtcgcttccttgagtcaggtgttgactttgccattgttagtgatgtc
atgccacgttgtgacaagtgggttcaagaattcttaaggcatgagataccttgtgtgttg
cctgattacttggtgacttatgtgtgcaaacctggttatcccctcaacaattatgtacaa
tacaacactcatgcttgggcagaaagggcgctgaaaaaacatgtcaatcgtttggaagag
attgttgaggagatggtaccgtcgaatgacaataagaatgatttagcatgccaagtatgc
gggttgcctgacagggaggaagtaatgctgatctgtggtgatgaaagtggctctcacgga
tgtggcattggcatgcacgtagattgctgcgatcctccccttgaatgtgtaccagaggaa
gactggttttgcccagaatgtaccaagactagaagcaacacaagcataaaaaggaagtcc
aaaaaggggacctctacttccaagaggaagaagtga
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