Nicotiana attenuata (coyote tobacco): 109215631
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Entry
109215631 CDS
T05870
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109215631
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109215631
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
109215631
NCBI-ProteinID:
XP_019235275
UniProt:
A0A1J6KA00
LinkDB
All DBs
Position
Unknown
AA seq
1957 aa
AA seq
DB search
MWTNVFKIGGLHQISWFQFLPHESDVSSLVDKSVKLDKKDAATWLVLSSHLQLQKEGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGQHSSVVEKAQSAVSKLRVLASGLWVAPGD
SEEVAAALSQALRNCMERKLRGLSYVRYGDVFTRHHPFSQNEELFRKGQPVVEFIFSATE
EAIFVHVIISAKHIRALSSGDIDKISEDTSNVSGERLPVIVSPHGMRGRLTGCCPADLVK
QVYLSSCKFSASNGIVGLPCNVSRSGYQLKGQNCYVEVSLGCTTPGNNNIKESSRMLIYP
PEAILVPVVQTACARSSLKRFWLQNWIGPSLSFTSSLMHCFDFSSDAKVDSTDGSWLDAN
IMRSNRHYNSSSNSNSSSVSSVSTSSSDSDYKTSGAGDLEADADSLMCRPSGLSSVDQSQ
NDNLKAGFKRSRTGISESFNQAGAVINPSTSDYASMEVNNSAITGGNDQTGLQWGWDDDD
RGVGMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMFPAADSADIGSSPCPSMMD
VQDQMLLPVGFPSFDSFNQPPPPASLDDSLSKQQEVIKSTAVANQVNNASAAIAGEFDHL
IKAEALMTFAPEYGAVETPTGEKSHSIFRNPYLPKSREVDTSNSSSNSYVYSATPPLSPC
FDACEGKSGVTVNLKTGAGRRDTSSIIQSKRYYTHIESGKQKNDGKLCGSDHSCATREAQ
VAQSPFYGFNSTNSVKSIHNKTEKANEALLKADSFGQSMKTVLATEVECLMCQAFMCKIR
HTLLSSSSYLPVGASRMSGSTIINQPQGEAVVTVDNMSSKSEMKKKEIIPVRIAGDIDGG
LLDGTLNAPVGVWRSVGVSKGMKQPSSALEACHSVQHNSFIEESMLAYGLRQPLQELLDG
MALLVQQATSLVDVALDADNNDGPYGWLALQEQWRRGFSCGPSMVHAGCGGVLASCHSLD
IAGVELIDPLSADVQASFTLTLLQNDIKTAMKSAFGTMEGPLSVVDWCKGRSQSNDGGIS
GDGFSVESTASASECRDSSSTISFSVGEPISPSQSSAGGSSLKDGIRVDEASERRLSQDT
CLSESEQLPGSRLRPTLSAVPYPAILVGYQDDWLKTSPSSLQLWEKAPFEPYAMPKHMSY
YVVCPDINALTTAATDFFQQLGTVYETCKLGTHSPQCMGNEMEIDSGKNVSSGFVLIDCP
QSMKIDSSSTSMLGSISDYFLSLSNGWDLESYLKSLSKVLRNLKLSSCMTMNPKEGSTGP
CTVIYVVCPFPEPLAVLQTVVESSIAVGSVVLSSDKERRSTLQNQVGKALSYSAAVDESL
SNVLTLSGFCIPKLILQIVTVDAIFRVTSPALSELLVLKEIAFTVYNKARRISRGSSSDM
VQSSSMSGRSHPVLMQMTSPVPGMWKDCVGPRSIGTSLQREAELDASLRSGSWDNWQTSR
GGSLGCDPNRIGDFSIQDEVRYLFEPLYILAEPGSLDRGLSFPMSGNLMAESSKLLLDDG
TSGNFMQSSASSGGGDTGPNTQSETSEPDGSGSAHQKSLPSLHCCYGWTEDWRWLVCIWT
DSRGELLDNYIYPFGGVSSRQDTKGLQSLFVQILQQGCQILQACPPESAIAKPRDFVIAR
IGSFFELECQEWQKALYAIGGSEVKKWSLQLRRSVPDGMSASSNGTSLQQQEIGLIQERA
LPPSPSPLYNPHSKVSSFMKGGMGQPSTRKQLIGGQGMVDNSRGLLQWVQSISFVSVSID
HSLQLMFQADIVSHGASQSSGVVSQPGYLEGYTPVKSLGSTSTSYILIPSPNMRFLPPVG
LQLRTCLTAESPPLAHLLHSKGCAIPLSTGFVVSKAVPTMRRDARSISKEEWPSVLSVGL
VDYYGGSNIIQEKFLKGVGKVGGRGTGSETRDVEVETHLILENIAAELHALSWMTVSPAY
LERRSALPFHCDMVLRLRRLLHFADKEVSRQPVKTQV
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgtgttcaagatcggcggtttacatcagatatcttggtttcagtttctt
cctcatgaatctgatgtcagctctctggtggacaagagtgtgaagctggataagaaagac
gctgctacatggctcgtgctctcatcgcatctgcaattgcagaaggaaggatttctcagc
acgtggaccaattcctttgttggaccttgggacccatctcagggtcttcataaccctgat
gagaagatcaagctctggctttttctccctgggcagcattcatctgttgttgaaaaggca
cagtcagctgtatccaaattaagagttttggcatctggtctctgggtggctcctggagat
tcagaagaggttgctgctgcgctatctcaggccttaaggaattgcatggaaagaaaacta
agaggactttcatatgtgagatatggagatgtatttactagacaccatccattttcacag
aatgaagagttgttcaggaagggacagccagtggttgagttcatattttctgctacggaa
gaggctatctttgtccacgttataatatctgcaaagcatatacgagcactttcaagtggt
gacattgataaaatatcagaggatacatctaatgtctctggtgagaggcttccagttatt
gtctcacctcatggaatgcgtgggaggctcactggatgttgccctgctgatcttgtgaag
caagtgtatcttagttcctgcaagtttagtgcttcaaacggtattgttgggctaccatgc
aatgtttctcgatctggttatcagcttaagggacagaattgctatgttgaagttagcctt
ggctgcactacaccaggaaacaacaatataaaagaaagttcaagaatgcttatttaccct
cctgaggctattcttgttccagtggtgcaaacagcatgtgctagatcttctctaaaaagg
ttctggctgcagaactggattgggccctcattgtcctttacatcctccttgatgcattgt
tttgattttagtagtgatgccaaagtcgattcgacagatggatcttggcttgatgcaaac
atcatgcgctcaaatcggcattataacagtagtagtaatagcaatagtagtagtgttagc
agcgtaagtacctcttccagtgatagtgattacaagacctcaggagctggcgatcttgaa
gcagatgccgattctttgatgtgtagaccatctggattatcttctgtggatcagtctcaa
aatgacaatcttaaagcgggctttaagaggtcacgaactgggatttcagagtcatttaat
caggcaggagcagtgataaatccatctacaagtgactatgcctcaatggaagttaataat
tctgcaataactggaggaaatgatcagactgggcttcagtggggttgggatgatgatgat
agaggtgtaggcatggatattcaggcacttctctcagagtttggagattttggtgacttc
tttgagaatgatgttttgccatttggagagcctccaggaactgcagagtctcaggctctt
atgtttcctgctgcagatagtgcggatattggtagcagcccctgtccttcgatgatggat
gtgcaagatcagatgcttctgccagtaggttttccatcatttgatagctttaatcaacca
ccaccgccagcaagtctggatgattcactgagcaaacagcaagaagttataaaaagcact
gcagttgctaatcaagtaaacaatgcttcagcagctattgctggtgaattcgatcactta
attaaagctgaagctctgatgacatttgctcctgagtatggagcagttgaaactcctaca
ggtgagaagtcccattcgattttcaggaatccctatctcccaaagtcccgggaagtggat
acttcaaattcaagctcaaatagctatgtctactctgcaaccccacctttatcgccttgc
tttgacgcatgtgaggggaagtctggtgttactgtaaacctcaaaacaggtgctggaagg
cgtgatacaagctccattattcaatcaaagagatattacactcatattgaaagtggaaaa
cagaaaaacgacggcaagttgtgtggttctgaccatagttgcgctacacgtgaggctcaa
gtagcacagtccccattttatggtttcaattcgacaaattctgttaaatctatccacaat
aaaaccgagaaagccaatgaagcattactaaaagcagacagctttggtcaatcaatgaaa
actgtgctagcaacagaagttgaatgccttatgtgccaggcatttatgtgtaagatacgg
catacactattatcttcaagcagctaccttcctgttggcgcgagcaggatgtcagggagt
accattataaaccagccacaaggtgaagcagtggttacagtggacaatatgtcaagcaaa
tccgagatgaaaaagaaagaaataataccagtcaggatagcgggtgatattgatggagga
ttactggatgggacccttaatgcaccagttggtgtgtggcgctctgttggagtttctaag
ggcatgaaacaaccatcatctgctttagaagcctgccactctgttcagcataattctttc
attgaggaaagtatgctagcttatgggctacggcaaccgcttcaggaactccttgatggg
atggctttacttgtgcagcaagctacatctcttgttgatgttgcactagatgctgataat
aatgatggtccttatggttggctcgcactgcaggagcagtggaggcgtggcttttcatgt
ggaccatccatggttcatgcaggttgtgggggagtattggcttcctgtcattcgctggat
attgctggtgtggagcttattgatccactttcagctgatgttcaggcatcatttaccctc
actctgctgcagaatgatataaaaacagctatgaaatctgcttttggtactatggaaggt
cctttatctgttgttgattggtgcaaaggtcgcagtcaatcaaatgatgggggaatatct
ggtgatggtttttctgttgagtcgactgcaagtgcaagtgaatgtcgagattcttcaagt
accatatctttttctgttggagaacctataagtccatctcagtcctccgctggtggatct
agtttgaaagatggaattagggtggacgaggcaagtgaacgcagattaagccaagacact
tgcctatcagagtcagagcagctaccaggctcaaggcttaggccaacattgtctgcagta
ccgtatcctgctatacttgttggataccaagacgattggcttaagacatcacctagttct
cttcagctctgggaaaaggcaccttttgagccttatgcaatgcccaagcatatgtcatat
tacgttgtctgcccagacatcaatgctctaacaacagctgcaactgattttttccaacag
cttggaactgtttatgaaacatgcaaactgggaactcattcacctcaatgtatgggaaat
gagatggagatagactccgggaagaatgtatcttctggttttgttctgattgattgccct
cagtcaatgaagatcgacagcagtagcacatctatgctgggatcaatcagtgattatttc
ctatccctctccaatggctgggatttagaaagctatttgaagtctctctcaaaagttctt
aggaatttaaagcttagttcatgcatgaccatgaatccaaaagaaggaagtactggtcca
tgtacagtgatatacgtggtttgccctttccctgagcctcttgcggtcctacagacggtg
gttgaatcttctattgctgttggatcagtggttctttcttcagacaaagagaggcgatct
acactgcagaatcaagtcgggaaggccttaagttactcagcagcagtggatgagtcactc
tcaaatgttttaacactttcagggttttgtattcctaagttgatattgcagattgtaact
gttgacgcaatttttagggttacaagtcctgctctgagtgagcttctcgtcctaaaggaa
attgctttcacagtttataacaaagcccgcagaatatctcgagggtcctccagtgacatg
gttcagtcatcatccatgtctggtagatctcatccggtcttgatgcaaatgacttcccca
gttccaggtatgtggaaggactgtgttggtcctcgaagcataggaacttcccttcagagg
gaggctgaacttgatgctagcctaaggtctggtagttgggacaactggcaaacatcaaga
gggggaagtctgggatgtgatccaaacagaattggggatttctctatccaagatgaagtt
cgttatttgtttgagcccctttacattcttgctgaaccaggttcattggatcgtggactc
tcatttcctatgtcgggtaatctaatggctgaatcttcaaagcttttgttagatgatggt
acaagtggaaattttatgcagagttcagcttcttcaggtggcggagacactggaccaaac
acacagtctgaaacatctgaaccagatggttctggttctgcacatcaaaagtcacttcca
agcctgcattgttgttatggatggactgaggattggcgctggctggtttgtatatggaca
gattccaggggagaattgcttgataattatatctatccatttggaggagttagtagtagg
caggatacgaaaggtctgcaatccttgtttgtgcaaattctgcagcaaggatgccagata
cttcaggcatgtcctcctgagtctgccattgccaagcctagggattttgttattgcacgt
attggaagcttctttgagcttgaatgccaggaatggcagaaagccctctatgcaattggg
ggatctgaggtgaagaaatggtctctgcagctaagacgatccgtgcctgatggaatgtcg
gcaagtagtaatgggacatccttgcagcaacaggaaataggtctgattcaggaaagagca
cttcctccctctcctagtccattgtacaatcctcactcaaaggtttcctctttcatgaaa
ggtggcatggggcaaccatccacaaggaagcagttaattggtggacagggtatggtggac
aactcgaggggtttacttcaatgggtgcaaagcattagttttgtctcagtttcaatagat
cattccttacagcttatgttccaagcagatatagtgagtcatggggcaagtcaaagtagt
ggcgttgtgagtcagccaggttatcttgaaggttatactccagtgaagtcccttggttct
acatccacctcctatattctaatcccgtcaccgaatatgcgattcctacctcctgttggt
cttcagcttcgcacttgcctaactgctgaatcaccaccactcgcccatcttcttcacagc
aagggctgtgctatccctctttcaactggttttgtggtttcaaaagcagtacctacaatg
aggagagatgcaaggagcatctctaaagaggaatggccctcagttctttctgtcggcctc
gttgattactatggcggcagcaacatcatccaggaaaaattcttgaagggtgtcggcaag
gttgggggaaggggtacaggctcagaaacaagagacgttgaagtagagactcacctgatt
ctcgagaacatagctgcagagctccatgctttatcatggatgaccgtaagtccagcatac
ttggagagaagatctgctttgccttttcactgtgacatggtattaaggcttcgaaggctc
cttcactttgctgataaggaagtttctcggcaacctgtgaaaacccaagtttag
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integrated database retrieval system
