Nicotiana attenuata (coyote tobacco): 109215648
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Entry
109215648 CDS
T05870
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic-like isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nau03012
]
109215648
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109215648
Translation factors [BR:
nau03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109215648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
DEAD
HA2_C
Helicase_C
DSRM_DHX29
HA2_N
nSTAND3
DND1_DSRM
AAA_19
AAA_22
ATPase
NPHP3_N
Rad17
dsrm
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109215648
NCBI-ProteinID:
XP_019235294
UniProt:
A0A1J6KBW1
LinkDB
All DBs
Position
Unknown
AA seq
1442 aa
AA seq
DB search
MAPKKKKPQSSSSKGKASSSSTGPKLQISAENENRLRRLLLNSGRSTQSPAPTPAEDALS
KAQKAKKLRSIYEKLSCEGFSDDQIERALSSLKERATFEAALDWLCLNLRGNELPLKFSS
GTSQLNEGSVGIISTAREDWVPSADSSVAEVKDERKPEVSVVPKGRSDSESLRTVERAQA
DWIRQYMEQQEEDEAESWESGLFDDGSLEQVSRKRRSIESIVQEFHNARLEAIHAKERGD
KKSHEQASRTIRKIKQEISALGLPDDILESAHESASDHAVLDTSSEKLDVDNVPSHNFRT
SNTHEQEIGIDKVAVNSSSNEFTENNPSSGPRDDKVAPGGEAEDLDLGDFLFEEVSSADV
SSTILELQKKEKMRELCSQKNLEKLEGIWKKGDPQKIPKAFLHQLCQRSGWEAPKYAKIP
GKGNNSHYTVSIMRKASGRGKSRKAGGLVTIELPSQDHTSSTTEDAQNRVAAYALHRLFP
DLPVHMPITEPYASLILQWEEGDSVIDIVDDQVERRAYFVDSLLDTSGSENITHCDVSNN
ASEEKFLEPHATEDKTAIADFTDRNPSKEAESFSLKKEQEGRKKLKKYQEMLKSRAALPI
ADLKGKILHSLEENDVLVICGETGCGKTTQVPQFILDDMIESGSGGHCNIICTQPRRIAA
ISVAERVADERCESSPGSSDSLVGYQVRLDSARNERTKLLFCTTGILLRMFSGNKNLAGV
SHIIVDEVHERSLLGDFLLIVLKSLIQKQSALGTAKLKVILMSATVDSHLFSHYFGHCPV
ITAQGRTHPVSTYFLEDIYESTNYRLASDSPASLSYGTSTREKNAPIGNHRGKKNLVLSG
WGDESLLSEEYINPYYDPSNYQNYSEQTQKSLRKLNEEIIDYDLLEDLVCYIDETYPEGA
ILVFLPGVGEIHTLLDRLSVSFQFSGQSSEWILPLHSSVASEDQKKVFMRPPVNIRKVII
ATNIAETSITIDDVVYVVDCGKHKENRYNPKKKLSSMVEDWISQANARQRRGRAGRVKPG
ICFCLYTSYRYEKLMRPYQIPEMLRMPLVELCLQIKLLSLGSIKLFLSMALEPPKDEAIA
SAISLLYEVGAVEGDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISAFLSYK
SPFVYPKDERQNVERAKLALLSDKLGGETDSGSGNWQSDHLLMMVAYKKWEKILRENGVK
AAKQFCSSYFLSSSVMYMIRDMRIQFGTLLADIGLINIPKKSEIDWKKKEKLDSWLSDIS
QPFNTNSNHSSILKAILCAGLYPNVSAREEGIATTALGNLKQSAGLSAKSNPAWYDGRRE
VHIHPSSINSNLKDFQYPFIVFLEKVETNKVFLRDTTVISPYTILLFGGPINIQHQTGRV
TIDGWLEVAAPAQTAVLFKELRLTLHDILKELIRNPQVSRVNDNEVLRSIIQLLLEEDKQ
RK
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgaagaagaagaaacctcaatcatcgtcatccaaaggcaaagcttcttcttct
tccactggtcccaaattgcaaatatctgccgaaaacgagaaccggctccgacggctgcta
cttaattccggccggtctacacaatctccagctccaactccagcagaggatgctctctct
aaagcacagaaggccaagaaacttcgttctatttacgaaaagctctcttgcgagggcttt
tccgacgatcaaatcgaacgcgctttatcctctctcaaggagagagctacgtttgaagct
gctttagattggttatgcttgaatttgcgagggaatgagcttcctctgaagttttccagt
ggtacttctcaattgaatgaaggttctgttggtatcatatcaactgctcgagaagattgg
gttccttcagcagattcatctgtggcagaagttaaagatgagagaaaacctgaagtttca
gttgtgccaaagggtcgaagtgatagtgaatctctacgtacagtcgaacgtgcacaagca
gattggatccgtcagtatatggaacaacaggaagaggatgaagctgaaagttgggaatct
ggtttgtttgacgatggttccctagagcaggtctcgcgaaaaaggcgtagtattgagtct
attgtccaagaatttcataatgcaaggttggaagctattcatgcaaaagagcgtggtgac
aaaaagagccatgaacaagctagccgaaccattcggaagatcaagcaggagatatctgct
ctaggactaccggatgatatcctggaatctgcacatgaaagtgcttccgaccatgcagtg
ttggacacatcttcagagaagcttgatgttgataatgttccttcacacaatttcagaacg
tcaaatactcatgaacaggagatcggaattgataaggtggctgtcaatagcagctccaat
gagttcactgaaaacaatccatcaagtggtcctagagatgataaggtggctccaggagga
gaagcagaagacttagatcttggtgatttcttatttgaagaagtttcctctgctgatgtg
tcatctacgatactagaactgcagaagaaagaaaagatgagagaattatgtagccagaaa
aacttagagaagttagaaggtatatggaagaagggagatccacaaaagattccaaaagct
tttcttcaccaactttgtcaaagatcagggtgggaggcaccaaaatatgcgaaaatacct
ggaaaaggaaataattcacattacactgttagtataatgcgaaaagccagtgggaggggt
aagagcagaaaagctggagggctagttacaatcgagcttcctagtcaggatcatacttct
tctactactgaggatgcacaaaacagagttgcagcctatgctctccatcgcttgtttcca
gatctcccagttcacatgccaattaccgagccatatgcatcacttattttgcagtgggag
gaaggtgattccgtgatagatatagtggatgatcaagtggaacgaagggcctatttcgtg
gattcattactagataccagcggttctgaaaacataactcattgtgatgtctccaataat
gctagtgaagaaaagtttttagagcctcacgccactgaagataaaacagcaattgctgat
tttacagacagaaacccaagtaaagaagcagaaagtttctctctgaaaaaggagcaagag
ggtagaaagaagttaaagaagtaccaggaaatgttgaaatcacgggctgcccttcctatt
gctgacttaaaaggcaagattctgcattcactggaggagaatgatgttttggtcatttgt
ggggaaacaggttgcgggaaaacaactcaggtccctcaatttatactggatgacatgatt
gaatcaggaagtgggggacattgtaacattatatgcacacaaccaaggagaatcgcggct
atttcagtggctgaaagagttgctgatgagcgttgtgaatcttcaccaggttcgagtgac
tccttggttggttaccaagttcgcctcgatagtgcaaggaatgagagaacaaagctcctc
ttttgtacaactggcattcttttgagaatgttttcaggaaataaaaacttggctggtgtt
agtcatatcattgttgatgaagtgcatgagaggtcacttctgggtgattttctgctcatt
gtcttgaagagtctcatccagaagcaatctgcccttggtactgcaaaactgaaagttata
ctcatgtctgcaacagtagattcacatttgttttctcattacttcggtcactgccctgta
attactgctcaaggccgaacacatcctgtttcaacttattttctcgaggatatttatgag
agtaccaactaccgccttgcatccgattctcctgcttctttgagctacgggacatctact
agggaaaagaatgctcctattggcaatcacagggggaagaagaaccttgtcctatctgga
tggggtgatgaatcgttgctctctgaagaatacattaatccctattatgatcccagtaat
tatcaaaactacagcgaacaaactcaaaaaagtttgaggaaattgaatgaagaaattatt
gattatgatcttctcgaagacctggtatgctacattgatgaaacatacccggagggtgct
atactggttttcttaccgggggtaggagaaatacataccttacttgatagactgtctgtc
tccttccagtttagtggacagtcttctgaatggattctccctttgcattcttctgtagca
tccgaggatcagaaaaaagtgtttatgagacctccagtaaacatccgtaaggttataata
gccacaaatattgcagagactagcataaccatagatgatgtagtttatgtggtagactgt
ggaaagcacaaagaaaatcgctataatccaaagaagaaattgtcaagcatggttgaagat
tggatatctcaagcaaatgcaaggcaacgtcgaggcagagctggacgtgtaaagccagga
atctgcttttgtctctatacttcttaccgatatgagaagctcatgcgaccttaccagatc
ccggagatgctgcgaatgcctttggtagaattgtgcttacaaatcaaactgctatcactt
ggaagcataaagctatttttgtctatggctcttgaacctccaaaggatgaagctattgcg
tcagcaatttctttattgtatgaggttggtgccgtcgaaggggatgaagagttaactcct
ctcgggtatcatttggcgagacttcctgttgatgtgttggttggaaagatgctgttatat
ggtggagtatttggctgtttgtcaccaattctatctatttcagccttcctgagttacaaa
tctccatttgtttatccaaaagatgagaggcaaaatgttgaaagagcaaagttggcactt
ttgagtgataagcttggtggtgaaactgactctggcagtggtaactggcaatctgaccat
ctcctaatgatggtagcgtataaaaagtgggagaaaattttgcgggagaatggagtcaaa
gcagcaaagcagttttgcagctcatatttcttaagcagttctgtcatgtatatgataaga
gacatgagaatacaatttggaacattgttagccgacattggactcatcaatatcccaaaa
aagtctgagattgattggaaaaagaaagagaagcttgacagttggctttcagatatatca
caaccttttaatacaaattcaaatcattcctcaattcttaaggccatattgtgtgcaggt
ctttatcccaatgtatctgccagagaagaaggcattgctacaactgctcttgggaaccta
aaacagagtgcaggtctttcagcaaagagtaaccctgcatggtatgatggaagacgcgaa
gttcacattcacccttcctcaatcaactctaacttaaaagattttcagtacccatttatc
gtctttcttgaaaaggtagagactaacaaggtatttttgcgagacaccactgttatctct
ccttatactatacttctttttggtggcccaataaacattcagcaccagactggaagagtt
accatagatggatggttagaagttgcagcaccagcacaaacagctgttctatttaaggaa
ctccggctaactcttcatgatattctcaaggagcttattcgaaatcctcaggtttccagg
gtgaatgataatgaagttctcagatctataatccagttgctattagaagaagataaacaa
agaaaataa
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integrated database retrieval system
