Nicotiana attenuata (coyote tobacco): 109216655
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Entry
109216655 CDS
T05870
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109216655
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109216655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109216655
NCBI-ProteinID:
XP_019236376
UniProt:
A0A1J6KKQ4
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MAVLPYSDVDSSLKALAGRAEGFGRFSIGGLNGPVYSVTTLADDGPGSLRHGCRKKEPLW
IVFEVSGTIHLASYLRVSSYKTIDGRGQRIKLTGKGLQLKDCEHIIVCNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFAQHDKTVLIGADPSHIG
DRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWGIYAICASVESQIYSQCNMYEA
TQKKKAFEYYTEKAADKEEAKTGLIRSEGDLFLNGAQGMLLTGVGEECVFHPSEFYPVWT
LEPASDSLKAVLQICTGWQSIPRPPEACADHTKPAC
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgttaccatattctgatgtagattcgagcttaaaagctttagccggtcgagcc
gaaggatttggcaggttttccatcggcggtctaaatggtccggtctattccgtcactaca
ttggccgatgatggtccaggatcacttcgtcatggatgccgtaagaaagaaccactatgg
attgtttttgaagtttcaggcaccattcatctcgcatcttacctacgtgtgtcatcttat
aaaactattgatggtcggggccaaaggataaaactcactggcaaaggcttacaattgaag
gattgtgagcacataatcgtgtgcaatttggagtttgaaggtggcagaggtcatgacgtt
gatggcattcaaataaaaccaaattctaggcacatttggatagaccgctgttctcttcgt
gattatgatgatgggctaatcgatataaccagacaaagcacggatatcactatttctaga
tgttattttgctcagcatgataagacagtgcttattggagcagacccgtctcatattggt
gatagatgtatcagagtgaccatccaccattgctttttcgatggcacacggcagaggcaa
cctcgtgttagatttggaaaagttcatttgtacaacaattacactagaaattggggtata
tatgctatttgtgccagcgtagaatcacagatatattctcaatgcaacatgtatgaagct
acacagaagaaaaaagcttttgaatactacacagagaaggcagcagataaggaggaagca
aagactggtttaatcagatctgaaggtgacttgtttcttaatggagctcagggaatgttg
ttaacaggtgttggtgaagagtgtgtttttcatccaagtgaattttatcctgtctggaca
ctggaacctgcctcagactccctcaaagctgttcttcagatctgcacaggttggcaatct
attccccggccaccagaagcatgtgctgatcatacgaaacctgcatgctag
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