Nicotiana attenuata (coyote tobacco): 109216747
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Entry
109216747 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109216747
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109216747
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
109216747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_16
Prok-RING_4
zinc_ribbon_16
RING_XB3-XBAT31
zf-HC5HC2H
zf-RING-like
MARVEL
zf-RING_4
Prok-RING_1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109216747
NCBI-ProteinID:
XP_019236473
UniProt:
A0A1J6KK09
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MEMYSWILRKFQSRLLLLAVLSFGLFSVKAEVAPSEDEDVVSSFQPSLAVVIGVLSIMFS
LTFLLLLYAKFCHRASSSVRNNTNIMHIQDGLVRSVLSCSSGIDKTVVESLPFFRFSYIR
GSKQGLECVVCLSKFEDIEILRLLPKCKHAFHIDCIDKWLEKHSTCPLCRHKVSAEDLSL
LTYSDSLRFLWNQPELRDESNLELYIQREENGSSRFSIGSSFKKEEESPIQENNIDNQNQ
KALHRFNHRIIVSDVVFKNRWSNVSFSDLMFLNSEMLNGMASNRFSSMDRITEQSTAKRV
IEEEGQRMNIKDEMERKRLFESKIQQNDLSQFPEASESRTNSSKSLSQNEKRCMSEIIVH
PRFIDFNNKNIGNRKLSERRRKLWLPIARRTVKWFANRERRSSHTENRRQTLNV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtattcttggattctcaggaagtttcaatcaagactgctattattagcagtc
ctttcatttggattatttagtgttaaagctgaggtcgctccatctgaagatgaagatgta
gttagcagtttccagccaagccttgctgtggttattggtgtcctctctatcatgttttca
ctaacttttcttcttctcctctatgccaagttctgtcatagggcatcttcttctgttcgt
aacaacaccaatattatgcatattcaagatggacttgttcgatcagtactgtcatgttcc
tcaggtatcgataaaactgtggtggaatcacttccatttttcagattctcttatatcaga
gggtccaaacaagggcttgaatgtgttgtttgcttatcaaaatttgaagatattgaaatc
cttagattgctgccaaagtgcaaacatgcttttcatattgactgtattgataagtggctg
gaaaaacattcaacctgtccactttgcaggcataaggtcagtgctgaagacctgtcatta
cttacttattcagacagtttgagattcttgtggaaccaacctgagctaagagatgaatca
aatttggaactatatattcaaagagaggaaaatggatcctcaagatttagtattggaagc
agctttaagaaggaagaagaatcgccaatacaagaaaacaatattgataatcaaaatcag
aaagcactacacaggttcaatcataggattatagtctcagatgttgtcttcaagaatcga
tggagtaatgtgagtttttcggaccttatgttcttgaattcagaaatgctcaatggcatg
gcaagcaacagattctcatcgatggacagaattactgagcaatccacggcgaaaagagtg
atagaagaagaaggtcaaagaatgaatatcaaggatgaaatggaaaggaaaagattgttt
gagagcaaaatccagcaaaatgatttatcacaatttccagaagcctcagaatcaagaacc
aattcatcaaaatcactaagtcaaaatgagaaaagatgcatgtcagaaattatagtgcat
ccaagattcatagatttcaacaacaagaacattggtaatagaaagctttcggaaaggagg
aggaagctttggcttccaattgcaaggagaacagtcaagtggtttgctaatagggaaaga
aggtcatcacatacagaaaacagaagacaaacactaaatgtatag
DBGET
integrated database retrieval system
