Nicotiana attenuata (coyote tobacco): 109216869
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Entry
109216869 CDS
T05870
Name
(RefSeq) protein SPA1-RELATED 2
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109216869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109216869
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
109216869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Pkinase
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
WDR54
Beta-prop_IFT140_1st
WD40_RFWD3
WD40_like
PK_Tyr_Ser-Thr
Beta-prop_WDR75_1st
NHR2
Motif
Other DBs
NCBI-GeneID:
109216869
NCBI-ProteinID:
XP_019236631
UniProt:
A0A1J6KMQ1
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MEETVDEAIGDEVNGLDAFDGRQLRSKENDYTLRSGNSNMLQSHEVVTLSEGDHYQNTHS
LFTDILDSKNLDRIGSSEHASASPRCMNDAGVMVEELTLRNYNGKNLAIVDTLGNKEIMQ
VRPNQWFYQLAGGSACGSSHGEDGDTLFTGLVNQNQKKLNENRNLDGENLQNNGDKAVSN
NLLPSSEGIRTKIFSKSGFSEYIVKSTLKGKGIICKKQLPRVSASESQGQMYPQCPNASS
TIVSPFQGIPKMGCSVNPNVYQDGIGLRERLKAGGNKLNKAEGLYIFKQVLDLVDFAHSQ
GIILQDLCPSCFKLLRSNQVVYIGASVRTQSTENVIDRGVPQVEHSQKERSSSGKSISSS
IDPCVKKQKLSEDTHLNRRWSQYPLMSGHKSACTNTKLNAAQGYGDESNEENCLKTELNN
SNNFILPQLSIMSKPLLTSMSFNLEKKWYTSPEQFSEGGCTFSSNIYCLGVLLFELLSSF
DCERSHAAAMLDLRHRILPSCFLSEHPKEAGFCLWLLHPEPSARPTTREILQSEVIGGIK
ELRGDLSLSSIHEEESESELLLYFLMSLQDQKQKDASKLVEELKCIEADVQEVQRRQSSN
GRCSSSHRESLILWENRFIQKGVSSSDAYPKLPPVCESETRLIKNIRQLESAYFYMRSNI
QPSDDVAMVRRTEEIFNNEENFVSTGNDNEKYRPTDQVGAFFDGLCKYARYSKFRVRGIL
RNADLNNSANVICSLSFDRDEEYLAAGGVSKKIKVFEYHALFNDTVDIHYPVIEMSNKSK
LSCICWNSYIRNYLATTDYDGAVKLWDASTGQAFSQLTEHNERAWSVDFSRVDPTKLASG
SDDHLVKLWSINEKNSVCTIRNKANVCCVQFSPDSSHFLAYSSADYKTYCYDLRNTSAPW
CVLAGHEKAVSYAKFLDAETLISASTDNSLKIWDLNKTNSSGYSADACVLTLKGHTNEKN
FVGMSVNDGYITCGSETNEVFSYYKSLPMPITSHKFGSIDPISGKETDDDNGQFVSSVCW
RRKSNTVLAANSSGCIKLLEMV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaactgttgatgaagctattggtgatgaggtgaatggactggatgcctttgat
ggtagacaacttcgaagtaaggagaatgactatactttgaggtccggaaactccaatatg
ctgcaatcacatgaagtggtcacacttagtgaaggtgatcattaccagaatactcacagt
ttgtttacagatatcctcgatagtaagaatctggacagaattggatcttctgaacatgca
agtgctagtcctcgttgtatgaatgatgctggggtcatggttgaagaattgacactgaga
aactacaatgggaaaaacttggctatagttgataccttgggcaataaagaaataatgcag
gttaggccaaaccagtggttttatcagctagcaggtggatctgcatgcggaagctcacat
ggggaagatggagacacattatttaccggacttgtgaatcagaatcagaaaaaattaaat
gaaaatcgtaatctagacggagaaaatttgcagaataatggtgataaagctgtttcgaac
aatttattaccctcttctgagggtatccggacgaagattttttccaagtcggggttttct
gaatatattgtgaaaagcacattaaaaggcaaaggaatcatatgcaaaaaacagttaccc
cgtgtatctgctagtgagtctcaaggccagatgtatccgcagtgtcctaatgcttcttcc
accatcgtttcaccttttcaaggtatccccaaaatgggctgcagtgttaatcccaatgtc
tatcaagatgggatcggtttaagagaacggctgaaagctgggggaaataaattgaacaaa
gctgaaggcttgtatattttcaaacaagttctggatttggtggattttgctcactcacaa
ggaattatcttacaagacttgtgtccatcttgctttaaattgttgcgctcaaaccaagtt
gtatatattggagcatctgtacgcactcagtccactgaaaatgtgattgatcgaggtgtt
cctcaggtggagcatagtcagaaagagagaagttcatccggaaaaagcatttcttcctcg
atcgatccttgtgtgaagaagcaaaaacttagtgaagacacgcaccttaataggaggtgg
tctcaatatcccttaatgtcaggccataaatctgcttgcacaaacactaaattaaatgct
gcacaaggctatggagatgagtcaaatgaagagaattgcctcaagacagaacttaacaac
tcgaacaattttatattgcctcaactgtccattatgtcaaaaccattgctgacttccatg
agctttaacttggagaagaagtggtataccagtcctgagcagttcagtgagggtggctgc
acattttcatcaaacatctactgcctgggggttcttctctttgagttgcttagctcattt
gactgtgaaaggtctcatgcagctgcaatgctggatcttcgccataggattcttccctct
tgtttcttgtcagagcatcccaaagaagctggattttgtctttggctgcttcatccagaa
ccttcagcacgtccaacaacaagggaaattttacagtctgaagttattggtggtattaaa
gaattacgtggagatttatcactgtcgtctattcacgaagaggaatctgagtcagaactg
ttgttgtacttcctcatgtcactgcaagatcaaaagcagaaggatgcctcaaagctagtg
gaagaactcaaatgtatagaagcagatgtccaagaggttcagaggcgccaaagcagcaac
ggccgttgttcgtcctcacaccgggaatctcttattttgtgggagaacaggtttattcag
aaaggagtatcaagttcagatgcgtatccgaagcttccacctgtatgtgagagtgaaact
agattgatcaagaatatcaggcagcttgagagtgcttacttctatatgcgatccaatatt
cagccttctgatgatgttgccatggtccgtagaactgaagaaatctttaataatgaggag
aactttgtctccacaggaaatgataatgagaagtatagacccacagatcaggttggggct
ttttttgatggcttatgcaagtatgctcggtatagcaagttcagagtaaggggaatatta
agaaatgcagatctgaataattctgcaaatgtcatttgttctctaagctttgacagggat
gaggaatatttagctgctggtggggtgtcaaagaaaattaaagtatttgagtatcatgcc
ctctttaatgatactgttgacattcattacccagttatcgagatgtcaaacaaatctaag
ctcagctgcatttgctggaacagttatatcaggaactatctggctaccactgactatgat
ggtgcggttaagttatgggatgcgtctactggtcaagctttttcgcagttgactgagcat
aatgaaagggcatggtctgtagacttttctcgtgtggatcccacaaagttagctagtgga
agtgacgatcatttggtgaaactttggagcatcaacgagaagaacagcgtgtgcacgatc
agaaacaaagcaaatgtttgctgtgttcagttttcacctgactccagtcattttctggct
tatagctccgccgattacaagacttattgctatgatcttcgaaatacctcagccccttgg
tgcgtattggctggccatgagaaagctgttagttatgcaaaatttttggatgctgaaacg
ctcatttctgcatccactgacaacagcctgaagatatgggatctcaataaaaccaactca
agtggctattcagccgatgcttgtgtgttaacccttaaagggcacaccaacgagaagaac
tttgtggggatgtctgtgaacgatggatacataacatgcgggtcagaaacaaatgaggtc
ttctcttattacaaatctctgcctatgcctattacttctcacaagtttggctctattgat
ccaatctctggtaaagagactgatgacgacaatgggcagtttgtttcaagtgtttgttgg
agacggaagtcaaacacggttcttgctgccaattccagtggctgcataaaactactagag
atggtttag
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integrated database retrieval system
