Nicotiana attenuata (coyote tobacco): 109217128
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Entry
109217128 CDS
T05870
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109217128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109217128
03036 Chromosome and associated proteins [BR:
nau03036
]
109217128
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109217128
Coactivators
SAGA/TFTC/STAGA complex
109217128
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109217128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
ParG
Motif
Other DBs
NCBI-GeneID:
109217128
NCBI-ProteinID:
XP_019236904
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIGGADNSQSQPSDSDSVPLSQGSSYTS
NQFASWQTSNHDENGSRHSLQESETVQQKEGNISDMQLKGHGTDSQNQQQKNDSSQEISS
LPLQHISSHDTYQTTEVEQDTLHSSKAVNIQNPEKNTQNPESQHLNLQGAQSQQSMQSLT
TGTSGLPLVAADASNQSESATGSSSQSAINVAKQGKQVPFAMLFPHIQPQLDKDRAMQLQ
TLYVKLKVKNEISKEGFVRHMRSIIGDQMLKMAVYKFQSQASRNSPSVPSQFPQSAASQQ
QHSQMPTDDSSNMAIESNAQKLREVENQADLRGAQGNQMPSSSLIAVKQERDHSPFPIQG
LNRQQQQHLHFSQASFPTFPNAGNNYSAYSASNVNSSTTQPLKQQSDDAQMRQFSAQQNR
NVTQLGVPTQAMGMMSAPKFEKQNTFGEAKRLPGGSLNIPSTSRIQQPSVQWQQSANKEQ
KSILSSPMTNLKSEPIDHFHDQLQRSQLSPFSSVQVEQGNSTSESSKDESIEQISRIGLS
TTTSMKPSNSASSSMSSQMDTSTLLSSRATSVTSLLGPGNNGKTPVKKPSIGQKKPLDTL
GSSPPPSGKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRVSEASRRV
VQEEEERLILQKIPLQKKLTEIMAKCGLKNMSNDVERCLSLCVEERMRGLISSLIRLSKQ
RVDIEKSRHRTIVTSDVREEILSINRKAREEWEKKQADVEKLQKANEPEGSNGVDGDKEK
DDGRGKSIKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGGDVASG
SQPSKDVTRRNLSTPTRTSKDHQEAENRSQSSAKVTPGAVRRAGRNQVITQTRIARSITV
KDVIAVLEREPQMSKSTLIYRLYEKARSNASAESS
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctatcatgaaactcctcgaagaagacgaggatgaaacaatgcattcgggg
gcggatgtggatgcattcactgctgccctaaatagggatattggaggcgcagataattca
caatctcagccatccgattccgatagcgtaccgttatctcaaggaagcagttatacctca
aatcagtttgcatcatggcaaacttctaaccatgacgaaaatggcagtcgtcatagtctt
caagaatcagagaccgttcagcaaaaggagggaaatatatctgatatgcagttaaaggga
catggtaccgattctcagaatcagcagcaaaagaatgattcctcacaggagatcagttcc
cttcctttgcagcatatatcttcccatgatacttatcaaaccacagaggttgaacaggac
acacttcattcttctaaagcagtgaatatacaaaatcctgaaaagaatactcaaaatcca
gaatctcaacatctaaacttacagggagcgcaaagtcagcagtccatgcagtccttgaca
acaggaactagtggtctgccacttgtggcagcagatgcaagtaatcagtcagaatcggcg
accgggtcgagtagccaatcagcaatcaatgtagctaaacagggaaaacaagtgcctttt
gccatgcttttccctcacatacaaccccagcttgataaggacagggcaatgcaactccag
actctttacgttaaactcaaagtaaaaaatgaaatttctaaggaaggttttgtaagacac
atgagaagtataattggtgaccaaatgctcaaaatggctgtatataaatttcaatctcag
gcatctagaaactcaccgagtgttcccagtcaatttcctcagtctgcggcttctcagcag
caacattcgcaaatgccaacagatgattctagtaatatggcaattgagagtaatgctcaa
aagttgcgcgaggtggaaaatcaggcagatttgcgtggagcccaaggaaaccagatgcct
tcttctagtttgattgctgtaaaacaagaaagggatcactcgccattcccaatacaggga
cttaataggcaacaacaacagcatttgcacttctcacaggcatcatttcccacatttcca
aatgcagggaacaattatagtgcatattctgcatctaatgtcaactcttcaacaacacaa
ccgcttaagcagcaatctgatgatgcacaaatgagacaattttcagctcaacagaacaga
aatgtaactcagttaggagtgccaacgcaggccatgggaatgatgagcgcccctaagttt
gagaagcaaaacacttttggcgaagccaaaagattacctggcgggagtcttaatattcca
agtacttcaagaatccagcagccttcagttcaatggcaacagtctgccaataaagagcag
aaaagtattctttcatcaccaatgaccaatctaaagtctgaaccaattgatcatttccat
gaccagctacaaagatcccagttgtcgcccttctcctctgttcaagtggagcaaggaaat
tccacttcagaaagttcaaaggatgaatctattgaacagatctccagaattggtttatca
acaaccactagcatgaaaccttcaaattcagcctcgtcttccatgtcatctcaaatggat
actagcacattgttgagttctcgggctacttctgtgacatctctacttgggccaggaaac
aatggaaagactcctgtgaaaaagccttccattggacagaagaagcccctcgatacgcta
ggttcctcacctccaccttcagggaagaagcaaaaggtttcaggagcttttttagatcag
agcattgaacaacttaatgatgttactgctgttagtggagttaatctaagggaagaggaa
gaacaactattttctgggcccaaggaggacagtcgagtttctgaagcatctcgacgagtt
gtgcaagaagaagaggaaaggctgattttgcagaaaattccacttcagaagaaattgaca
gaaatcatggcaaaatgtggtttaaagaatatgagcaatgatgtggaaagatgcttgtca
ttgtgtgtggaggaaagaatgcgtggacttataagtagtctcatcagactgtcaaaacag
agagttgacatagagaagtcaagacacagaacaattgtcacttcagatgttcgtgaagaa
atcctgtcaatcaatcgaaaagcccgggaagaatgggaaaagaaacaggctgatgtggaa
aaactccaaaaggcaaatgaacctgaaggtagtaatggagttgacggtgataaggagaag
gatgatggtcgtgggaaatcaataaaggcaaacaaggaagaggatgataagatgcgaact
acagctgcaaatgttgctgctcgagctgctgttggaggggatgacatgttgtcaaagtgg
caattgatggctgagcaggccaggcaaaagcgtgaagggggaggtgatgtggcttctggt
tcacagcctagtaaagatgtgactcggaggaatttatcgactcccacaagaacctcaaag
gaccatcaagaagccgagaacaggagccagtcatctgcaaaagtcacccctggtgctgtg
agaagagctgggagaaatcaagtgataacccagactaggattgctcgcagtattactgta
aaggatgtgatcgctgtcctagaaagggaacctcaaatgtctaagtctacattgatatac
cgcttgtatgagaaagctcggtccaatgcttcagctgaatcatcgtga
DBGET
integrated database retrieval system
