Nicotiana attenuata (coyote tobacco): 109217619
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Entry
109217619 CDS
T05870
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109217619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109217619
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
Pre-60S particles
RNases
109217619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
THP2
Nmad5
KIP1
Motif
Other DBs
NCBI-GeneID:
109217619
NCBI-ProteinID:
XP_019237430
UniProt:
A0A1J6JZ97
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MSCQNSKTEETPDEQHNTSKDPKHKPFFDVYGPQGRADIVFNQPESNSTLNLQDVQGLVT
WVLADGFMPSWAFIKNKPLIPKVVMLYVPGLDAALYLSQSKVLKGFKECCGIPRPVLALS
CVSDGNQTIDALLTYKSKRKRKEAEHISPINTEPSEQGAETPTTEPLSFVDLKKDIPFPI
SYYTLTDKELEENGYCCDQPEFLSTLPAPSGTSPHEILALDCEMCITREGFELTRVTLVD
VKGQVLLDKLVKPSNDIVDYNTRYSGITCQMLEDVTTTLKDIQEEFLKLVHKETILVGHS
LENDLLALKIIHNLVIDTAVLYKHPRGSYKAALRVLSRKFLGREIQDSGNGHDSIEDAKA
TLELALLKIKNGPDFGIPQCQRLLRQKLLSVLSDSGKKSSIIDHISIVRRYAAELSHTIP
VSSDDEALSKANKEVRNDKVQFIWTQFAELYAYLRKQADDPEKLNKKLAKMIALLTCEKK
STSRRNVKYDVTPELKDILSHMNRRVRSIYSNLPLNAMLIICTGHGDTAIVQRVRKILSE
QTDASMSRENIVKVLEELQAQAEVGLCFVGVKH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagttgccagaacagtaaaacagaagaaacgcccgacgaacaacacaataccagcaaa
gaccctaaacacaaacccttctttgacgtttacggccctcaggggagagcagatattgtt
ttcaatcaaccggaatccaattcaactttgaaccttcaagacgtgcaaggtcttgtcaca
tgggtgcttgctgatgggttcatgccgtcatgggcttttatcaaaaacaagcctttgatc
cctaaagtggttatgctgtatgttcctggccttgatgccgctctatatttgtcacagtct
aaagtgctcaaaggtttcaaagaatgctgtggtattccgaggccagttttagctctcagc
tgtgtatcagatggaaatcagacaatagatgcactccttacgtacaaatcaaagaggaaa
aggaaagaagctgagcacatttcaccaataaacaccgagccttctgaacaaggtgctgag
actcccactacggagcctctatcttttgttgacctcaaaaaggatataccatttcccatc
agttattacacacttacggataaggaactagaagaaaatggatattgttgtgaccaacca
gaatttctttcaacgctccctgctccttcaggaacatctccacatgaaattttggccctt
gactgcgagatgtgtattacaagggaaggctttgagcttaccagagtgacactagtggat
gttaaaggacaggttctgctggataaattggtcaaaccatcaaacgacattgttgactac
aatactaggtatagtggaattacttgtcagatgttggaggatgtgactaccactcttaaa
gatatccaggaggagttcttgaaactggttcacaaggagaccattctggttgggcattcc
ttggaaaatgatttattagccctgaagatcattcataatttggtaatagatactgctgtg
ttgtacaaacatccaagaggatcctacaaagctgctcttcgcgttctgagcagaaaattt
ctcggtagggagatacaggactcgggcaatgggcatgacagcattgaagatgcaaaagct
acactggaactagcactactaaaaataaaaaatgggcctgattttggtatacctcaatgt
caacgattactgcggcagaagcttctttcagttctgagtgactctggcaaaaaatcctca
atcattgatcatatatccatagtgaggagatatgctgctgaattgtcccatacaattcca
gtatcatctgatgatgaagcactttcaaaagccaacaaagaggtcagaaatgataaagta
cagtttatctggacgcaatttgcagagttatatgcatatctcaggaagcaagcagatgac
cctgagaagctaaataaaaagttggcgaaaatgatagcattgctgacgtgtgagaaaaag
tctactagcagaagaaatgtcaaatatgatgtcacccctgaactgaaggacattctgagc
cacatgaatcgtagagtcaggagcatttactccaatcttcctctaaatgcaatgcttatt
atttgcactggtcatggagacactgcaatagttcaaagagtgaggaaaatcttgtcggag
cagacggacgcctcaatgtcccgtgagaatattgttaaagtcttggaagagttgcaggca
caagctgaagttggtttgtgctttgtaggtgtcaaacactga
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