Nicotiana attenuata (coyote tobacco): 109217879
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Entry
109217879 CDS
T05870
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109217879
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109217879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109217879
NCBI-ProteinID:
XP_019237712
UniProt:
A0A1J6JWV4
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MAVSWRSCLSLLVVIMLAINNVTASNSPEEAKQFQSLNNSTMANRLSEENVPNHEKHAVD
DPDMVASMVDMSIRNSTERRKLGFFSCGSGNPIDDCWRCDRNWQRNRKRLADCAIGFGRN
AIGGRDGKYYVVTDAGDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFK
TIDGRGVNVHIAYGACITVQFVTNIIIHGINIHDCKPTGNAMVRSSPGHYGWRTMADGDG
ISIFGSSHVWVDHNSLANCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKI
MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPA
NPFAKQVTHRVEPSEGEWKRWNWRSDGDLMLNGAYFTPSGRGAGASYARASSLAAKSSSL
VGTLTSNAGALNCRRGRQC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcttggagatcatgtctatcattgctagttgtgataatgctagccatcaat
aatgtcactgccagtaacagtcctgaagaagcaaagcaatttcagagcttaaacaactcg
acaatggcgaacaggttaagtgaagaaaatgtaccaaaccatgaaaaacatgctgtagat
gatccagatatggttgcttccatggtagacatgagcattcggaatagtacagaaaggagg
aaattgggttttttctcatgtggatctggaaatcctattgacgattgctggcgttgtgac
cgcaattggcaacgtaaccgcaagcgtctagctgattgtgctattggcttcggacgcaat
gctattggtggccgcgatggcaagtactatgttgtcactgacgcaggtgacgatgacccc
gtaaatcccagacccggaacacttcgtcatgctgtaattcaggacagaccattgtggatt
gtgtttaaacgggacatggttattacacttaagcaagagcttattatgaacagtttcaag
acaattgatgggcgtggtgtgaatgttcatattgcctatggggcttgtataacggtccaa
tttgttactaatatcattattcacggcatcaatattcatgattgtaaaccaactggtaat
gccatggttcgtagctcgccaggtcactatggttggaggacaatggctgatggtgatggc
atttccatctttgggtccagccacgtttgggttgatcacaactctctcgctaactgtgcc
gatggcctcattgatgctatcatgggatcaactgcaattaccatctccaacaattatttt
acccaccacaatgaggtgatgttattgggtcacagcgactcctatgttagagacaagatt
atgcaagtgactattgcctacaaccattttggtgagggtctcattcagagaatgccaagg
tgtagacatggttatttccatgtggtgaacaatgactatacacactgggagatgtatgct
attggtggcagcgcttctcctacaattaacagccaaggcaacagataccttgccccagcc
aacccttttgccaaacaggtgacacatagagtggagccatcagaaggagagtggaagcgt
tggaactggagatcagatggagaccttatgcttaatggagcctactttaccccatccgga
cgtggcgctggagccagttatgctagggcatcaagcttagcagccaagtcctcttcacta
gttggcactcttacctcaaatgctggtgcacttaactgccgcaggggccgccaatgttaa
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