Nicotiana attenuata (coyote tobacco): 109217916
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Entry
109217916 CDS
T05870
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nau03041
]
109217916
03009 Ribosome biogenesis [BR:
nau03009
]
109217916
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109217916
Spliceosome [BR:
nau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109217916
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
90S particles
Helicases
109217916
Pre-60S particles
109217916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Pox_Ag35
eIF3_subunit
Motif
Other DBs
NCBI-GeneID:
109217916
NCBI-ProteinID:
XP_019237759
UniProt:
A0A1J6K0K4
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MADVEENPNIVVAEEESIKKKRKRKRDKKNKMAVEKETKKEEESEGKEEEEENEEEEQHN
ELKEEIKKEMKSGSGIMTTELFSSLEISEPTMKAINDMGFQHMTQIQARAIAPLLEGKDV
LGAARTGSGKTLAFLIPAVELLYNVRFTPRNGTGVIVICPTRELAIQTHSVAKDLLKYHS
QTLALVIGGSARRAEAERIAKGANLLVATPGRLLDHLRNTKGFIYKNLKCLMIDEADRIL
EANFEEDMQQIIKLLPKQGRQTALFSATQTKKVEDLARLSLDKPVYIDVDDGRRRVTNEG
LQQGYCVVPSAKRFLLLYSFLKRNLSKKIMVFFSSCNSVKFHSELLRYIKIECHDIHGKQ
KQQKRTSTFFEFCEAKTGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARG
EGAKGNALLFLIPEELQFLKYLKAAKVPVKEYEFDHKKVANVQSLLEKLVANNYYLNQSA
KEAYRSYILAYNSHSMKEIFNVHRLDLQAVASSFCFSNPPKVHLNIDSNASKFRNKKRKV
EGSRNGFSDSNPYGKKGSDDTRQFVRY
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtagaagaaaaccctaatatagtagttgcagaagaagagtcaattaagaag
aagagaaagagaaagagagacaagaagaataaaatggccgtagaaaaagagacgaagaag
gaagaagaaagcgaaggcaaagaagaagaagaagagaatgaggaggaagagcagcataat
gaactgaaggaggagattaagaaagagatgaaaagtggttccggtattatgactacggag
ttgttttcttctcttgaaatttctgagcccactatgaaggccatcaacgacatgggcttt
cagcacatgactcagatccaagccagggcaattgctcctcttctggaaggcaaagatgtc
cttggagctgcaagaactggttctggtaaaacgcttgcatttctgataccagccgtggag
ttgttgtataatgtccgttttacacctcgtaatggaactggggttattgtcatttgccca
acaagagaactggctatacagacgcattctgtggcaaaggaccttctcaagtatcattcg
cagactctcgccttggttattggtggttcagcaagaagagcagaggcagagcgtattgca
aagggggctaatctcttagtagccacccctggtcgacttcttgatcatcttagaaatacc
aaaggcttcatttataagaacctaaagtgtctcatgatagacgaggctgataggattttg
gaagcgaactttgaggaagacatgcagcaaatcatcaaacttctaccaaagcaggggagg
cagactgctctcttttcagccacacaaacaaaaaaggttgaggaccttgctcgcttatct
ttggacaaacctgtctacattgatgtggatgatgggaggaggagggttacaaacgaaggg
ctgcaacaaggatactgtgttgtcccaagcgctaagagatttcttctcctttattcattc
ttgaagaggaacctgtcaaagaaaataatggttttcttctcatcttgcaactctgtcaag
tttcattccgagctacttcgctatatcaagattgaatgccatgatattcatgggaagcag
aagcagcaaaaacgaacttctaccttttttgaattctgtgaagcaaaaacaggcatcctg
ttatgcacggatgtcgccgcacgtggtcttgatattcctgctgtggattggattgtgcag
tttgatccccctgatgaacccaaggagtatatacacagagttggtcgaacagcacgtggg
gaaggtgctaaaggaaatgcattactattcttgattccggaagagttgcagtttctcaag
tacctcaaggcggcaaaagtgcctgtaaaagaatatgaatttgatcataagaaggtggcc
aatgtgcagtctctcctggaaaaattggtcgcaaataactattacttgaatcagtcagct
aaagaggcatataggtcctatattctagcatataattctcattccatgaaggaaatattc
aacgttcaccgacttgatctacaggctgtagcttcttcgttctgtttctctaatcctcca
aaagtacacctcaacatagatagcaatgcgtccaagttcaggaacaaaaagcgcaaagtt
gaaggaagccgaaatgggttcagtgatagcaatccttacggaaagaaaggaagtgacgat
acaaggcagtttgtaagatattaa
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