Nicotiana attenuata (coyote tobacco): 109218408
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Entry
109218408 CDS
T05870
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109218408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109218408
03110 Chaperones and folding catalysts [BR:
nau03110
]
109218408
03029 Mitochondrial biogenesis [BR:
nau03029
]
109218408
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nau04147
]
109218408
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109218408
Messenger RNA biogenesis [BR:
nau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109218408
Chaperones and folding catalysts [BR:
nau03110
]
Heat shock proteins
HSP60 / Chaperonin
109218408
Mitochondrial biogenesis [BR:
nau03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109218408
Exosome [BR:
nau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109218408
Exosomal proteins of other body fluids (saliva and urine)
109218408
Exosomal proteins of breast cancer cells
109218408
Exosomal proteins of colorectal cancer cells
109218408
Exosomal proteins of bladder cancer cells
109218408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
109218408
NCBI-ProteinID:
XP_019238318
UniProt:
A0A1J6KA01
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MAATFTSVCSIASTSQAVDKKLINSSETLSSFSAISSSSLGGRRKNTVLKKRYDFKIQAA
TKKLHFNQDGDAIRKLQAGVDKLANLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREV
ELEDPVENIGASLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPIQITRGI
ERTTKALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMGKVGRKGVVTLEEGR
GSENSLYVVEGMQFDRGYISPYFVTDNEKMVAEYENCKLLLVDKKITNARDLVNVLEEAI
RGGYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVI
REEVGLSLDRAGSEVLGHAGKVVLSKDSTTIVGDGSTQEAVNKRIAQIKRIVEATEQDYE
KEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLR
LAAKVEDIKATLDDDEQKIGADIVKRALRYPMKLIAKNAGVNGSVVIEKVLSNDNPKYGY
NAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVVTENKEPEPVVAGNPMDN
SGYGY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaccttcacttcagtttgttcgattgcttccaccagccaagcagtggataag
aaactcataaattcttctgaaactttatcttcattctctgcaatttcttcgagttcatta
gggggcaggagaaagaatacagttttaaagaaaagatatgatttcaagattcaggctgcg
accaagaagttacacttcaatcaggatggtgatgccattaggaagctgcaagcaggtgtt
gacaagcttgcaaatttagtaggtgttactcttggtccaaaaggaagaaatgtagttctt
gagagcaagtatggctctcccaaaattgtaaatgatggtgttactgtagctagagaggtt
gaactggaagaccctgttgagaatattggtgcaagtttggtgagacaagctgcttcaaag
acaaatgacttggctggggatggcacaactacatctgttgttttggcacaggggctcata
gctgaaggtgttaaggtggtcgcagctggtgcaaaccctattcagattaccaggggcatt
gagaggaccactaaagccctggtcgctgagctgaaaaagatgtctaaagaggttgaggac
agtgaactagcggatgtagctgcagttagtgcaggaaacaactatgaagttggaaatatg
atagcagaagcaatgggtaaagtgggtaggaaaggtgtagtgactcttgaggaagggaga
ggttctgagaacagcttgtatgttgtggaaggcatgcaatttgaccgtggctatatctcc
ccatactttgttacagacaatgagaagatggtagctgaatatgaaaactgcaagctgctt
ctggtagacaagaagataacaaatgcaagggacttggttaatgttttggaagaagcaatc
aggggtggatacccaatattgataattgctgaagacattgagcaggaagctctagccact
ctggttgtgaacaaacttagaggagcgctgaaaattgctgcactcaaagcccctggtttt
ggggagcgaaaaagccaatatcttgacgacattgctatccttactggaggtactgtcatc
agagaggaggttggtttatccctggacagggctggaagcgaggtcttagggcatgctgga
aaggtggtgttgtcaaaagattcaacaacaattgttggtgatggtagtacccaggaagca
gtaaacaaaagaattgcccaaattaaaagaattgttgaggcaactgaacaggattacgag
aaggaaaaacttaatgagagaattgcaaaactatcagggggcgttgccgtaattcaggtt
ggtgcacaaactgaaacggaactcaaagaaaagaaattgagagtagaggatgctctcaat
gcgacaaaggcagccgttgaggaaggcattgttgtcggcggtggatgcaccttgttgcgg
cttgctgccaaagttgaagacattaaagcaactcttgatgatgatgaacaaaagattgga
gctgatattgtcaagagagctttgaggtaccctatgaagttaatagccaagaatgctggt
gtcaatggaagtgttgtgattgagaaggtgttgtccaatgacaatccgaagtatggttat
aatgcggccactggaaaatatgaagatttaatggctgctggtataattgatcctacaaaa
gtggtaagatgttgcttggagcatgcagcttctgtagcaaggacctttctgacatcagat
gctgtagttactgagaacaaggagcctgaacctgtggttgctggaaacccaatggacaat
tcaggttatggatactaa
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