Nicotiana attenuata (coyote tobacco): 109218524
Help
Entry
109218524 CDS
T05870
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like
KO
K14791
periodic tryptophan protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109218524
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
90S particles
Other 90S particles
109218524
Pre-60S particles
Other pre-60S particles
109218524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
WD_LRWD1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
109218524
NCBI-ProteinID:
XP_019238437
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MIAAISWVPKGVAKSVPAAAEPPSKEEIEELLKSGLLDKSEVSDNEEAEEDMNVDESKEN
EDDEVAVALAAANALGKATKDVSLGTDNITNGLKELNMENYDDEEDGIELFGSGLKDLYY
PSNDMDPYLKDKDNDSEEDEDMTIKPDDSIIVCASNDDDVSHLEIWILEVLSDGAVNMYV
HHEIIIPAFPLCTAWLDCPIKSDEGKGNFIAVGSMELAIEIWDLDILDEVQPAAVLGGIA
DIKKKGKKKTIKYKKDSHSDSVLGLAWNKEYRNMLASASADQSVKVWDVNTRSCTVTMND
HTDKVQAVAWNPFASQILLSGSFDHTVCLKDVRYPSHSGYKFPVSADVESLAWDPHSEHS
FVVSLENGTVTSFDIRAASSDSSSATKPSFTIHAHDKAVSSMSFNPLVPNLLATGSTDKM
VKLWDLSNNQPSCIASRNPKAGAVFSVSFSDDCPFFLAIGGSKGKLQLWDVSSEDAVLKK
YGKYVAQKGQLPKS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagctatttcgtgggttcccaaaggggttgcaaagtcagttccagctgcggct
gagcctccttcaaaggaagaaattgaggagcttttgaagagtggcctccttgataaaagt
gaagttagtgataatgaggaagctgaagaagatatgaatgttgatgaatccaaggaaaat
gaagatgatgaagttgctgttgcactagcagctgctaatgcacttggaaaagctacaaaa
gatgtctctctaggaaccgataacataacaaatggtttaaaggaattgaatatggaaaac
tacgatgatgaggaggatggcattgagcttttcggttcgggactcaaagacctgtactac
ccaagtaatgacatggacccatatctcaaggataaggataatgactcagaggaggacgag
gacatgacaataaagcctgatgattctattatagtttgtgcaagcaatgatgatgacgtc
agtcatcttgagatctggattttggaagttctatcagatggcgctgtaaacatgtatgtt
catcatgagattattattcctgcgtttcctctctgcacagcatggctcgattgccctatt
aaaagtgacgaggggaaagggaacttcatagctgtgggttcaatggaactagcgattgaa
atttgggacctagacatattggatgaggtgcaaccagctgctgtattaggtggaattgct
gacataaagaaaaaggggaagaagaaaaccatcaaatacaaaaaggatagccactccgat
tcagtacttggtctcgcttggaacaaggaatataggaatatgcttgccagtgctagtgct
gatcaatcagtcaaggtttgggatgtgaataccagaagctgtactgtcactatgaacgac
catactgacaaggttcaagcagttgcatggaatccatttgcatcacagattcttctgagc
gggtcattcgatcatacagtttgcttgaaggatgtgaggtatccatctcacagtggatat
aagtttccagtttccgctgacgttgaaagcttggcttgggatccacattctgagcattca
tttgtggtcagcttggagaatggtacagttactagttttgatatccgtgctgctagttct
gattcgagttctgcgacaaagccaagtttcaccatccatgctcatgataaagcagtgtcc
tcgatgtcctttaatcctctagtcccaaatcttcttgcaactggttccacggacaagatg
gttaaactttgggatttgagcaacaatcaaccttcttgtattgcatcaaggaatccaaaa
gccggagctgtcttctctgtttccttctctgatgattgtcccttttttcttgctattggt
ggttctaaagggaagttgcagctatgggatgtttcttcagaagatgcggtgttgaagaaa
tatgggaaatatgtcgcgcaaaaagggcagttgcccaaatcataa
DBGET
integrated database retrieval system
