Nicotiana attenuata (coyote tobacco): 109218940
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Entry
109218940 CDS
T05870
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109218940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109218940
03036 Chromosome and associated proteins [BR:
nau03036
]
109218940
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109218940
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109218940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
109218940
NCBI-ProteinID:
XP_019238880
UniProt:
A0A1J6KQI6
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MLMFSFKNNTAPSSGLFSSSNLFGSTSGIQQNGNPSVPFGTSPSSFGASSPSFSSINLFG
STSGIQQIKNSNGNPSVPQWFGSSGATSSASLLSPFGSSTSFGGTTSFNATNNATAFQTQ
GKSLGSSSTLPTFGKKYEGNSVAYKPLLWSRDASVSDSSIFGSYSFGQPAVSTPGKVVTT
PLLKSSDFGKSAFGINKEGSRMASYTATKEKESKEKIQSICGMQTYEDKSHEELRFKDYQ
LGDKGQTCASIFGVSGTSKFGVIDKSRPFTSPVFNPSTVDQPFYSHCPNPFALKRPGIDL
LPNENSSTTSSTPLFPKSQQSTVSHIFPPKTSFLNSDVSSSPWTNSSPFAPLKAASTSST
NSIFSPSCYPWALSTSSVLLSPPSTTSPCLVSPSPAHHFDQNRSFSPFNLPTLPTVSPPS
LLPTPVSTTAPAQSSWQLQPTLPSLFNVPSTPSSLFPTFVPLAPTQITPERTPNIEARIS
PAISSQLLTENGQGVGHPGINVQQSYSPSITGLQPSPIMVPSETQPAVQVFVGRPDSATS
VQYGISSLPVSDKTAPVRRRSSLIIRHSSLSRHRLPPQKYNPTSDKPKVPFFMDKENASG
IVSNKNVIISRENPRDWVRPTTREFPLGSDSCRLSQLKHASADGMDDGVKVNDSCDKPNI
APEEKMHYDKSGHCVQVSLESEDVDAIMPKLQLADYYTVPPMQELISKEKEDPGFCCHVK
DFVVGRHDYGSIKLLGETDVRNLDLDSAVYFNRREVIIYMDESKKPPVGQGLNKPAEITL
LNVKCINKSKEYTDGPVVNKYRDMLVKKAMEQSAEFVSYDPVEGQWKFRVSHF
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgttttcctttaaaaataataccgcaccatcttcaggcctctttagcagtagc
aacctatttggttctacatccggaattcaacagaatgggaatccttctgtgccatttgga
acctcaccgtcttctttcggtgcttcaagcccgtcatttagcagcatcaatctttttggt
tctacatctggaattcaacagattaagaactctaatggtaatccttctgtgccacaatgg
tttggaagtagtggagcgacctcatcagcatcactactttctccctttggaagttcaacg
tcttttggtggaaccacatcctttaatgcaacaaacaatgctacagcttttcaaacacaa
ggcaaatctctgggctcgtcgtccactttaccaacatttggaaagaaatatgaaggtaat
agcgtggcctataaacctctgttgtggtccagagatgccagtgtttcagactcctcaata
tttggttcctactccttcggccagccagcagtatccacgccaggtaaagtagttactaca
ccattgctcaagagctctgattttggaaagtcagctttcggtattaataaggaaggaagt
agaatggcatcatacactgcaactaaagagaaagagagcaaggaaaagattcaatccatt
tgtggcatgcagacttatgaagataaaagccacgaagagttgaggtttaaggactatcag
ttaggggataaaggtcagacatgtgcttctatatttggtgtttcaggcacatctaaattt
ggtgtcattgacaaatcaaggcctttcacatcaccagtatttaacccatcgactgttgat
caacctttttattctcattgtccaaatccatttgccttgaaaagaccagggattgactta
ctaccaaatgagaattctagcacaacttcatctaccccattatttccaaagtcacagcag
tcaactgtttcccatatatttccccccaaaacatcattcttaaactcagatgtttcttct
tctccatggaccaattcaagcccttttgcacctttaaaagcggcttccacttcttccact
aactccatcttttctccgtcatgttatccatgggctttatcaacgtcttctgttctattg
tctccaccatctactacttctccgtgtttggtctcaccttccccagcccatcattttgat
cagaatcgctctttctctccttttaacttgcccaccttacctactgtatcaccgccatcc
cttcttccaactcctgtctcgactacagcaccagctcaatcatcctggcagttgcagcct
actttaccaagcctttttaatgttccaagcacaccatcctctttgtttcccacattcgtt
ccacttgctcctactcaaattactccagaaaggactcctaatattgaagcaaggatttca
cccgccatctcttctcagctattgacagaaaatggacaaggagttggtcatccgggtatc
aatgtacaacagtcttactctccaagcatcacaggattgcagccatcaccaattatggtt
ccttctgaaacacaacctgcagtccaggtattcgttggacgcccagattcggcaacatcc
gtgcagtatggaatatcaagcttacctgtttctgacaaaactgctccggtcagacggaga
tcctcgttgataattcgacattcatctctaagtcggcataggttgccacctcaaaaatac
aatcctactagtgataaaccaaaggttcccttttttatggataaagaaaacgcttctggc
atagtaagcaacaaaaatgtgatcatttcaagggaaaatccaagggattgggttcgtcct
accactagagaatttcctttgggctctgattcatgtagattgtctcaactgaagcatgca
tccgcggatgggatggacgatggagtcaaggttaatgacagttgcgacaagcctaacata
gctccagaagagaagatgcattatgataaatctggacattgtgtccaagtttcacttgaa
agtgaggatgttgacgccataatgcccaagctccaactcgctgattactacacagttcct
cctatgcaggaattgatatcaaaggagaaggaagatcctggtttctgttgccacgtgaag
gactttgtggtaggaagacatgactatggaagcatcaagttgttgggagaaacagatgtc
cggaatcttgatcttgattctgctgtctattttaatcgtcgtgaggtaatcatctatatg
gatgagagcaagaaacctccggtcggacaaggcctcaacaagccagctgagataactctc
cttaatgtcaaatgcatcaacaaatcgaaggagtacacagatggaccagtggttaacaag
tacagagatatgcttgttaagaaagcaatggagcaaagtgcagaatttgtttcttatgat
ccagtggaagggcagtggaaatttagggtctcacacttctag
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