Nicotiana attenuata (coyote tobacco): 109219159
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Entry
109219159 CDS
T05870
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109219159
04121 Ubiquitin system [BR:
nau04121
]
109219159
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109219159
Membrane trafficking [BR:
nau04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109219159
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109219159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Anti-TRAP
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109219159
NCBI-ProteinID:
XP_019239133
UniProt:
A0A1J6KQ07
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MSSRENPNNGIRNFRRYWCYECHRTVRISPENPSEIVCPRCFGHFLCEIEETNARQILDF
TAFDPSPEARILEALTLMLDPNLFNRSSSGNAVPIFRRSDGTETIVPPDSIRPTREQRRT
RDSWLRPRRRYSFLSNDTDEWTPESGILARPRSWIILRPAGEYSSGGPNRLGERQLGPPS
GVNDRDYFTGPGLENLIEELTENDRPGPAPAPEPIINSIPTVVITPEHLRDDSECPVCKE
KFKIGGEARELPCKHIYHSDCIVPWLRLHNSCPVCRNPLPVSSETQMDTSDDCLEEGINR
QRRCFRLGQIAASLWPFRSRYRPLRNHDEPSGSSCHIL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaagagaaaaccctaataatgggatcaggaacttccggcgttactggtgttat
gaatgccatcgcactgtcagaatatcgccggaaaacccttcggagatagtttgtcctcga
tgtttcggccacttcctttgcgaaatcgaagagacaaacgctagacaaatcttggacttc
actgcatttgatccttccccagaagctagaattcttgaagctctaactctcatgcttgat
cctaatttgttcaacagatctagcagtggcaatgcagttcccatttttcgacgatcggac
gggacagaaaccatagtaccgcctgattctatcaggcctacacgtgaacaacgcagaaca
cgagactcctggctaaggccaagaagacgatactcatttctaagtaatgacacggatgaa
tggactccggaaagtggaattctagcacgtccacgttcatggattattcttcggccagcc
ggagaatattcttccggtggacctaatcgactaggagaaaggcagctaggtccaccttca
ggagtgaacgacagagattactttacaggtccaggccttgaaaacctaatagaagagtta
actgaaaatgatcgaccaggtccagcaccggcaccagagccaatcataaattcaattccg
acagtggtgattacgccagaacacttaagggatgattcagaatgtcctgtttgtaaggaa
aagttcaaaataggcggagaagcaagagagttgccatgcaaacatatataccattccgat
tgcattgtgccttggttaaggcttcataattcttgcccggtttgtcgaaatccgttgccg
gtttcttctgaaactcaaatggatacttcggatgattgtcttgaagaagggatcaataga
cagcggcgttgcttcagacttggacaaattgcagcttctctttggccatttcgttcgagg
tatcgccctttgcgtaaccatgatgaaccgtcggggtcttcatgtcatattctttag
DBGET
integrated database retrieval system
