Nicotiana attenuata (coyote tobacco): 109219239
Help
Entry
109219239 CDS
T05870
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1 isoform X1
KO
K14172
light-harvesting complex II chlorophyll a/b binding protein 7
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00196
Photosynthesis - antenna proteins
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
109219239
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
nau00194
]
109219239
Photosynthesis proteins [BR:
nau00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
109219239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Dynein_attach_N
DUF2391
Motif
Other DBs
NCBI-GeneID:
109219239
NCBI-ProteinID:
XP_019239226
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MTLLQLPHPSSSTFITLPKFSPSRSILNPFARHKASWQELAGVLVFSAIPFTAVKAIANS
TFGETLRKRLEEKKKAAVENSAKFRALAQMARNDSIWYGEDRPRWLGPISYDYPAYLTGE
LPGDYAFDIWGLSKDPMALQKYFNNHGEAQLNCSWNLFQLSWLLHSYELLHARWAMLAAL
GALIPELLNLTGLFQFVEPVWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQALL
MVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSEDPMAFEELKVKEIKNGRLA
MVAWLGFYVQAALTGKGPVQNLLEHISDPFHNNLLSLLKSL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgactctgctccagcttccccatccttcatcctccactttcataaccctcccaaagttt
tctcccagtcgaagtatactcaatccctttgcgcgccacaaagcttcatggcaggagctc
gccggcgttttggtattctcagcgattccattcaccgccgtcaaagctatcgccaacagt
accttcggcgaaacactccgtaaacgcttggaagagaaaaagaaggcagcagtagagaat
tccgcaaagttcagggcacttgcacaaatggcgagaaacgatagtatctggtatggagaa
gatcgcccccgctggcttggtccaatttcttatgactaccctgcttatcttaccggggag
ctaccgggggactatgcatttgacatctgggggttgagcaaggatcccatggccctccag
aagtactttaataaccatggagaagctcagttaaattgctcttggaacttatttcagttg
tcatggttgcttcacagttacgaattattacacgcccggtgggctatgctggctgctctt
ggtgctttgattcctgaactgttaaacctgacaggactctttcagtttgtggaacctgtt
tggtggcgtgtgggatattcaaagcttaagggagatacacttgactacctagggatccct
ggactccatttagctggaagtcaaggagtcattgtcatagccatttgccaagcccttttg
atggttggaccagaatatgcaagatattgtgggattgaggctttggaacccctagggatt
tacctgcctggtgatatcaattatcctggaggtgttctttttgatccactgaatctctct
gaagatccaatggcttttgaagagctaaaggtgaaagaaataaaaaatggtcgccttgct
atggttgcctggttaggcttttatgtccaagcggctcttacaggtaaaggccccgtgcaa
aaccttctggagcatatttcagatccatttcacaataacttgctctctcttctaaagtct
ctgtag
DBGET
integrated database retrieval system
