Nicotiana attenuata (coyote tobacco): 109219471
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Entry
109219471 CDS
T05870
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109219471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109219471
03110 Chaperones and folding catalysts [BR:
nau03110
]
109219471
03029 Mitochondrial biogenesis [BR:
nau03029
]
109219471
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nau04147
]
109219471
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109219471
Messenger RNA biogenesis [BR:
nau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109219471
Chaperones and folding catalysts [BR:
nau03110
]
Heat shock proteins
HSP60 / Chaperonin
109219471
Mitochondrial biogenesis [BR:
nau03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109219471
Exosome [BR:
nau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109219471
Exosomal proteins of other body fluids (saliva and urine)
109219471
Exosomal proteins of breast cancer cells
109219471
Exosomal proteins of colorectal cancer cells
109219471
Exosomal proteins of bladder cancer cells
109219471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
109219471
NCBI-ProteinID:
XP_019239475
UniProt:
A0A1J6KDU1
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSCSLNHLPAITLKNGSVHRISKRVSGSMLNTRAMAKELYFNHDGSTTKKLLAGVDLVAE
LVGVTMGPKGRNVVLGNKYGPPKIVNDGETVLKEIQLEDPLENVGVKLVREAGAKTNNLA
GDGCTTSIVLARGLIAEGVKVTAMGANVVQVSRGIEKTAKALVSELKLMSREVEDHELED
VAAVSAGNDYAIGSIISEALRQVGKKGVVTIEKGNYTETNLQVVEGMQFDRGYLSPYFVT
DRRKRIVELHNCKLLLVDKKITNPKELVKILDNAVKEKYPVLIVAEGIEQDALAPVIRNK
LRGVLKVAAIKAPSFGERKSHCLDDIAILTGGTVIRDDMGLTLENAHKDLLGTASKVVIT
KDSTLIVTDGNTRAAVSKRVSQIQKLVENTEENFQKKILNERIARLSGGIAIIQVGAQTQ
VELKDKQLRIEDALNAARAATEEGVVVGGGCCLLRLSSKVDTIKEMLDNDDQKIGADIFK
RALSYPAKQIAKNAGVNGNIVVEKILSVDNMKYGYNAARDRYEDLMAAKILDPAKVVRCC
LEHAAAVAKTFLISDAVVIDIPEPVSRQMRRPPMPTSGARLTDLTGDGARIFTKGSQNIK
NSTQRRQGNLTI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagttgttctttgaatcatttacctgcaattactttgaaaaatggttcagtacacaga
atttctaaaagggtgtctggttctatgttgaacacaagagctatggctaaagaactgtac
tttaaccatgatggttctacaacaaagaaacttctggcaggtgtggatttggtagcagag
ttggttggagtgacaatgggtccaaagggaaggaatgtagtgcttggaaataagtatggt
cctcccaagattgttaatgatggtgaaactgttcttaaagagattcagctggaggatcct
ttggaaaatgtcggagtaaaattggttagggaagccggtgccaagactaataatcttgct
ggtgatggttgcacaacatctatagtgcttgctcggggtctgattgctgaaggtgtcaag
gttactgcaatgggcgcaaatgttgtccaagtgtctcgcggaattgagaaaactgctaaa
gccctcgtttctgagctcaagctgatgtccagagaggttgaggatcacgagctggaagac
gttgctgctgttagtgctggcaacgattatgccatcgggagcataatttcggaagctctt
agacaggttggaaaaaaaggtgttgtcacaattgagaaagggaactatactgaaaccaat
ctacaagttgtagaaggaatgcagtttgatcgtggctatttgtcaccttattttgtaact
gatcgacgaaagaggattgtggagcttcataattgtaagttgcttttggttgataaaaaa
attacaaacccgaaggagttggtaaaaattttggacaatgcagtaaaggagaaatacccg
gttttgatagttgcagagggcattgagcaggatgctttggctccagtaattaggaacaaa
ctcaggggtgtcctaaaggtagctgctataaaagctccatcttttggggagcgcaaaagc
cattgcttagatgacatcgctatcttgactggaggaactgtgatcagagacgacatggga
ttgactcttgaaaatgctcacaaggacttgttgggaactgcttcaaaggtggtgattact
aaggactctacattgatagttactgatggaaatactcgagcggctgttagcaagagggtt
tctcagatacaaaagcttgttgagaacacagaagaaaatttccaaaagaagatcttgaat
gaaagaattgcaagattatctggtggtattgccatcattcaggtgggagcacaaacacaa
gttgagttgaaagacaaacaactaaggattgaggatgccctcaatgccgcaagggctgct
actgaggaaggagtagtagtgggtggtggctgttgtcttctgcgactatcgtcaaaggtg
gatactatcaaagaaatgctagacaatgacgatcagaagataggagctgatatttttaaa
agagcgctttcctatcctgcaaaacagatagcaaagaatgctggtgtaaatgggaatatt
gttgtagagaagattttgtcagtcgataacatgaaatatggatataatgctgcaagagac
agatatgaagatttgatggctgccaaaattttggatcctgcaaaggttgttagatgttgc
ctagagcatgcagcagcagttgctaagaccttcctaatatctgatgccgttgttattgac
atccccgaaccggtatccagacagatgagaagaccaccaatgccaacttcaggtgcaagg
ctcactgatctcacaggtgatggagccagaattttcactaagggaagtcaaaatataaag
aatagcacacaaagaagacaagggaatttaacaatatag
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