Nicotiana attenuata (coyote tobacco): 109220886
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Entry
109220886 CDS
T05870
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03030
DNA replication
nau03410
Base excision repair
nau03420
Nucleotide excision repair
nau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109220886
03410 Base excision repair
109220886
03420 Nucleotide excision repair
109220886
03430 Mismatch repair
109220886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109220886
03036 Chromosome and associated proteins [BR:
nau03036
]
109220886
03400 DNA repair and recombination proteins [BR:
nau03400
]
109220886
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109220886
DNA Replication Termination Factors
ELG1-RFC complex
109220886
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109220886
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109220886
Check point factors
HRAD17(Rad24)-RFC complex
109220886
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND_NTPase5
AAA_22
Mg_chelatase
AAA_lid_RFC1
AAA_16
Rad17
Viral_helicase1
RuvB_N
RCF1-5-like_lid
AAA_11
AAA_5
nSTAND3
AAA_19
AAA_assoc_2
AAA_25
AAA_28
DNAX_ATPase_lid
ABC_tran
AAA_24
MeaB
bpMoxR
IstB_IS21
AAA_30
AAA_18
AAA_7
RNA_helicase
AAA_3
NTPase_1
KTI12
SRP54
DO-GTPase1
AAA_29
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
109220886
NCBI-ProteinID:
XP_019240896
UniProt:
A0A1J6JTT5
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MASSSTTTSSGPEIPWVEKFRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGK
TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVIILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRL
MAVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFGFVNQENVFKVCDQPHPLH
VKNMVRNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFMKETGF
AHMRICDGVGSYLQMCGLLAKLSLVRETAKAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcttctacgacgacatcatcaggcccagaaatcccatgggtagagaagttt
cgacccacaaaggtatcggacattgtaggcaacgaagatgctgtctccagactccaagtt
attgctcgtgatggcaacatgcccaatcttatcttagccggtcctcccggtactggcaaa
accactagtatattggctcttgctcatgaacttctggggccaaactataaggaggctgtt
ttggagctaaacgcatcagatgatagaggcattgatgttgtcagaaacaaaatcaagatg
tttgctcagaagaaagtaactctaccccccgggcggcacaaagtaattattttggacgag
gctgacagcatgacatctggagctcagcaagcactgaggaggacaatggaaatatactcg
aactccactcgctttgctctcgcctgcaacacttcttctaagattatcgagcctattcag
agtagatgtgccctggtccgatttgcaagattatctgaccaagagatccttggacgcctt
atggccgtggttgcagcagaaaaggttccttatgtacccgaaggtcttgaggctattata
tttactgctgatggagatatgagacaggccttaaataacttacaagcaacacacagtgga
tttggttttgtcaaccaagagaatgttttcaaggtttgtgaccagccccatccgttgcac
gtgaaaaatatggtgcggaatgtccttgaagggaaatttgatgatgcttgcgcgggtcta
aaggctctatatgaccttggctattctcccaccgatattatcacaaccctcttccgaatt
ataaagaactatgatatggcagaatatgtcaaactggagttcatgaaggaaactggtttt
gcccacatgaggatctgcgatggggttggttcatatcttcagatgtgcggtcttctggct
aaactatcattggttcgagaaacggccaaggctgcatga
DBGET
integrated database retrieval system
