Nicotiana attenuata (coyote tobacco): 109221030
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Entry
109221030 CDS
T05870
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nau03000
]
109221030
03036 Chromosome and associated proteins [BR:
nau03036
]
109221030
Transcription factors [BR:
nau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
109221030
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
109221030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
CDC45
YL1
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109221030
NCBI-ProteinID:
XP_019241037
UniProt:
A0A1J6KCX9
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MTDGHQFNNISLGGRGGTNPGQLKVQSGGILWKKQGGGKAVEVDKEDIVGLTWMKVPRTN
QLGVRIKDGLYYKFTGFRDQDVASLTAYFQNTCGISPEEKQLSVSGKNWGEVDLNGNMLA
FLVGSKQAFEISLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFDGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRIFLLPKHNQPHTLVVITLDPPIRKGQTLYPHIVLQFETDNVVDLSLALS
EDLLNAKYKDRLLPGYKGLIHDIFTQILRGLSGAKVTKPGKFRSSQDGYAVKSSLKAEDG
LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGTANMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLNEARATEGVPVLPDEDDAVDPHLERIKNEAGGDDSDEED
EDFVLDKDDGGSPTDDSGGDESDASDSGGEKEKPAKKPKKEATVSKPSASRKKADDDGSK
KKKQKKKKDPNAPKRAISAFMFFSQSERESVKKSFPGISFTETGKVLGERWNKLSAEEKE
PYEAMAKADKKRYSEQISGYKNPQSTGMDSGNESESS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcatcagttcaacaacatctctctcggcggccgtggaggcactaatcca
gggcagctcaaggttcagtcgggaggtatactatggaagaaacaaggtggtggtaaggct
gtggaggtggacaaggaagacatagtgggccttacttggatgaaggttcctcgaactaat
cagctgggtgtacggatcaaggatggtctttactacaaatttactggcttccgtgaccag
gatgttgcgagtttgaccgcctatttccagaatacttgcggaatatctccggaggaaaag
cagctatcagttagtggaaaaaattggggagaagttgatctaaatgggaatatgcttgct
tttcttgttggttctaaacaagcatttgagatatcattagcagatgtttcgcaaacacag
cttcaaggaaaaaatgatgtcatgttggagttccatgtagatgatacaactggggctaat
gagaaagactcgctgatggaaatcagctttcacatccctaattcaaacactcaatttgtt
ggtgatgaaaaccgacctcctgctcaagttttccgggacaaaatcatgtcgatggctgat
gttggtgccggaggtgaggaagctgttgtcacatttgacggcattgccatacttactcca
aggggccgttacaatgttgagcttcatctctcattcttgcgcttgcaagggcaagccaat
gactttaaaattcaatacagcagcgtagtccgtatttttttgttgccaaagcataaccaa
ccacacactctagtagttatcactcttgatcctccgattaggaaggggcaaactttgtat
ccgcacattgtattgcagtttgagacagacaatgtcgtagacctttcgctggctttgagt
gaagatctattaaatgcgaaatacaaagataggctgcttccgggttacaagggtcttatc
catgacatctttactcaaattttacgcggcttgtctggtgccaaagtcactaaaccaggg
aagttccgtagcagtcaagatgggtatgcggtgaagtcttcattgaaagctgaagatgga
cttctctatcctcttgaaaagagtttcttctttttacctaaaccaccaactcttatactg
catgaggagattgattatgtggagtttgagaggcacgctgcgggcacagccaacatgcat
tactttgatcttctcatcagactgaagactgaacaagaacatcttttccggaatatccag
agaaatgagtaccacaatctttttgatttcatcagttcaaagggtctgaaaataatgaac
cttaatgaagctcgggctacagaaggtgttcctgttttgcctgatgaagatgatgctgtt
gatccacatcttgagcgtattaagaatgaagccggtggagatgatagtgatgaagaggat
gaagattttgtccttgacaaggatgatggagggtctcctactgatgattctggaggggat
gaatctgatgccagtgatagtggtggtgaaaaagagaaacctgcaaagaagcccaaaaag
gaggctactgtgtcaaagccatctgcaagcaggaaaaaggcagatgatgatggatcgaag
aagaagaaacagaaaaagaagaaggatccaaatgctccgaagagggcaattagtgctttc
atgttcttctcacagagtgaaagagagagtgtgaagaaaagttttcctggaatctccttc
acggagactgggaaggttcttggtgaaagatggaacaagctgtcagctgaggagaaagaa
ccgtatgaggcaatggctaaggcagataagaagcgctacagcgaacaaatcagtggttac
aagaaccctcagtcgaccggcatggattcagggaacgaatctgagagttcctaa
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