Nicotiana attenuata (coyote tobacco): 109221032
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Entry
109221032 CDS
T05870
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109221032
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109221032
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
zf-TFIIB
NosD
Motif
Other DBs
NCBI-GeneID:
109221032
NCBI-ProteinID:
XP_019241038
UniProt:
A0A1J6K3Y7
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MGGPKLINLSLFLFSTFWAIIPGLNGHIGDFDEVWRRRAQEAEEWALKAYEPDPVNVTLA
FAKQTRESMKELKEVNKLATNETRRELRGFHKKYAGPCLVTNPIDRCWRCQGNWVDNRKR
LADCAMGFGKGTTGGKAGQFYVVTDSSDDSSNPKPGTLRHAVIQKEPLWIIFAESMTIRL
HQELIMQSDKTIDGRGVNVHIAYGAGITLQYVKNVIIHGLHIHDIVVGNGGMVISAVDHV
GIRTQSDGDGISIFGSSNIWIDHVSMWRCSDGLIDAVEGSTAITISNGHFTDHNEVMLFG
ASDSSSIDQRMQITVAFNHFGKRLVQRMPRCRWGFIHVVNNDYTHWNMYAIGGSQHPTII
SQGNRFIAPPDIFKKEITKRDYAPESVWKQWTWRSQGDLFMNGAFFVESGDPDWTKKHQN
LFDGISSAPGEQVTWITRFAGALNCRPGHAC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacctaagctgataaatttgtctctgtttttattttccactttttgggctata
attccaggcctaaatggtcacattggtgatttcgatgaagtgtggcggaggcgagcccaa
gaagctgaagaatgggcccttaaggcctatgagcccgacccggttaatgtcacccttgct
tttgccaagcaaactagggagtcaatgaaggaattaaaggaagtgaataagctagcaacg
aatgaaacaaggagggaattaagaggctttcacaagaaatacgctgggccttgtttagtc
accaatcccattgataggtgctggagatgtcaaggtaattgggtcgacaatcgtaaaaga
ttagcagattgcgcaatgggctttggcaaagggaccaccggcggcaaagccggccaattc
tacgtcgtcaccgactcttccgacgacagcagcaaccctaagccgggaaccctccgtcac
gctgtcattcaaaaggagccattgtggatcatttttgcagaaagcatgaccattagatta
catcaggagctgataatgcaaagcgataagaccattgatggtcgtggtgttaacgttcat
attgcatatggtgcaggtatcaccttacaatacgtcaagaacgtgatcatccacggtctc
cacattcacgacattgtcgtaggcaatggtggcatggtcataagcgcggtggaccatgtc
ggaataaggacacagagcgatggagatggtatttccatatttggttcatccaatatttgg
attgatcatgtgtcaatgtggcgttgtagtgatgggcttattgatgctgtggagggatca
actgctattaccatatcaaatggacatttcactgatcataatgaggtgatgctttttggt
gcaagtgacagttcttcaattgatcaaagaatgcaaattactgtggctttcaatcatttt
gggaagagattggtacagagaatgccaaggtgtagatggggttttattcatgttgttaac
aatgactacactcattggaatatgtatgctattggtggtagccaacatcccactattatt
agccagggcaatcgtttcattgctcctcctgacattttcaagaaggagataacaaagagg
gactatgccccagaatcagtgtggaaacagtggacatggagatcacaaggtgatctattc
atgaatggagcattctttgttgaatctggagatccagattggaccaagaaacaccagaac
ctttttgatgggatatcatcagccccaggggaacaagtcacttggattacaagatttgca
ggggctctcaattgcaggccaggacatgcttgttaa
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