Nicotiana attenuata (coyote tobacco): 109223180
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Entry
109223180 CDS
T05870
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03440
Homologous recombination
nau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109223180
03460 Fanconi anemia pathway
109223180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109223180
03036 Chromosome and associated proteins [BR:
nau03036
]
109223180
03400 DNA repair and recombination proteins [BR:
nau03400
]
109223180
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109223180
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109223180
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
109223180
FA (Fanconi anemia) pathway
Downstream FA components
109223180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
109223180
NCBI-ProteinID:
XP_019242933
UniProt:
A0A1J6IIQ9
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Position
3:788696..806902
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AA seq
1137 aa
AA seq
DB search
MPTWQLYSAAGNDFRWKISDEETKIEESSLALAAPQQLQSMADLLRQGRSKLAGSSDTSF
TANFPVFRTGSGKPVAVKQSSISRALSILNDKNNVVRDTGQGIGRENSFAFQEAAFQKGS
GKALNAPESFFLSGLEKQFNTSNSMFQTGSGKAVSISSAGLNRAKALLGLEENGDSETFQ
GSEKKNRSSDERFGFRSSVPFVAVEGIANTWSTKASAASLSPFDVKLNSSVCAAEELVPD
FLHRADKPPPIKFHTAGGRSISVSSEALKRARSLLGDPELGCLVDEKDVVDPLFSFPKDH
KYVDHSSIKELNSDTPVSLLSAAKGSGSSSLFTPPFGSTLYHKKSSVKTENLAPASNLMK
EFDAVAKESTSRPDHSIPQHGEAFNKNSAAIDLRENDIPSKPKLLQRPSRGPLVNISNNI
GAGSADRNQNFGQKRKPGRGSFVSPFKKPRIAKIVTPLKRNDSGASNGFSNSAPQLPSQK
GKASVRYPFHVARLYMKEYLGDPPSFQSKLENLPDEVRRMNPDIAETHVFNDKSCSGCIG
VKSFWEMLSQSGASMQYVSKEWVTNHYKWIVWKLASYERCYSTKFSGKLLTICNVLEELK
YRYEREVNYGHRSAIKRILEGDVPPSSMMVLCISKVYSICNSPVGPQFSLSDTTENGACA
KIELTDGWYSITAVLDILLSKKLAAGKLFVGQKLRIWGARFCGWTGPVSPLEVSGTTSLL
LHINGAYRAHWASRLGLCKGGAIPLSFLSIKDGGGSVPLTLVGISRIYPVLYRERLRNGG
FVVRSERMEAKEMQSFNQRRCRVVEGITSESQRAKRDAYIGSDHESEEGARILKILERAA
EPELLMAEMSKEQLNAFASYQAKLEASRQSDLQKSLEKALQAAGLAERDVTPFMRVRVVG
LTSKSTPSKCCPQEGLITIWNPTEKQQSELAEGQAFAVTGLTPISSDSSTLYLQAKGSTA
KWRPLSPMEIEGFEPFFCPRRSVPLSKLGEVPMSREFDIAAVVVFVGQLYTEAHQSKQWV
FVADGSTSTCDSNDESETVMATSFTSPCVETDSFAPINSNLVGSVVSFCNLIKRARDNVN
NLWVAEATENSTYYLNFDHSHCSHLKEASASAERWAKISGSRLEKLRGKVLSIISCR
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggcagttgtactccgccgccgggaatgatttccgatggaaaatctccgat
gaagagactaaaatcgaagagtcgagcttagccctagcagctcctcagcagctccaatcc
atggccgacctcttgcgtcaaggaagatcgaaattagcggggagtagtgatacaagtttc
acggcgaattttccagtttttcgaactggatccgggaagcctgtggcagtgaagcagtct
tcgatatcaagagctctttcgatccttaatgataaaaacaatgtggtccgggacacagga
caagggattggaagagagaacagttttgcctttcaggaagctgcgttccagaaaggctca
gggaaagctcttaatgctccagaatcttttttcctttctggcttggagaaacaatttaac
acgtcgaactcaatgttccagacaggctctggtaaagcagttagtatatcttccgcaggt
cttaatagggccaaggcattgttgggcttggaagaaaatggtgacagtgaaacatttcaa
ggttctgaaaagaaaaatcgatcttcagacgagcgctttgggtttcggagttcagttcct
ttcgtggcagtagaggggattgctaacacatggtctactaaagcttcagcagcttcactg
tctccgtttgatgttaaacttaactcctcagtttgtgcagcggaggagttagtaccagat
tttctgcatcgtgcagataaacctcctccgataaagtttcatactgctggtggtagatca
atatcagtttcttctgaggcattgaaacgtgcaaggagtctgcttggagatccagagctg
ggatgtcttgtagatgaaaaggatgtggttgatccattgttttcttttccaaaagaccac
aaatatgttgatcactcctccattaaagaattaaactcagatactcctgtttccctctta
tcggcagcaaaaggcagtggctcgtcaagcctttttacacccccatttggatcaactttg
taccataagaagtcttcggttaaaacagagaatctcgctccagcaagtaacttgatgaag
gagtttgatgctgtggcaaaagaaagcacgagtaggccggaccatagtattcctcagcat
ggagaagcattcaacaagaactcagcagcgattgacctaagagaaaatgacatcccttca
aaacctaaattgctacaaaggccttctaggggtcctttggtgaatatctcaaataacatt
ggagctggatctgcagatagaaaccaaaactttggtcagaagaggaaacctggaagggga
agttttgtttctccatttaagaagcctcgaattgccaaaattgtcacccctctcaaaaga
aacgattccggtgcttctaatggattctcaaattcagcaccacaattaccctctcaaaaa
ggaaaagcttcagttcgatatccattccatgttgcacgattgtatatgaaggagtatctt
ggggatcccccatcattccagagcaagctagagaatctgccagatgaagtgagaaggatg
aatccagatattgctgaaactcatgtgttcaatgataaatcttgctcaggttgcattgga
gtaaagtctttctgggagatgctgtctcaatcaggggcttctatgcaatatgtctctaaa
gagtgggttacaaatcactataagtggattgtttggaaacttgcatcttatgagaggtgt
tatagtaccaaattttctgggaagcttttgacaatctgcaatgtacttgaagaattaaag
tacagatatgaaagagaagtaaattatggtcatcgatctgcaattaagagaattctagaa
ggagacgtcccaccttcttcgatgatggtgctctgcatttccaaggtctattcaatttgc
aactccccagttggacctcaattttctttgtctgacacgaccgaaaatggagcttgtgca
aaaattgaactgacagatgggtggtattcaattactgctgtcttagatatactattatcc
aagaagttggctgctggaaagctgtttgttggccaaaagcttaggatctggggagctcga
ttctgtggctggacaggtcctgtttcaccacttgaggtgtcaggaacgactagtttgcta
ctgcatataaatggggcatatagagctcattgggcatctcgtttggggttatgtaaaggt
ggtgccattccattatcatttttgtcaatcaaggatggtggaggttctgttccacttaca
ttggtcggaatttcaaggatatatcctgttctctacagggaaaggttaaggaatggtggt
ttcgttgtaagatctgaaaggatggaagctaaagagatgcagtcttttaatcaaagacga
tgtagagttgtggagggaataacctcagaatctcaaagggcaaagagagatgcgtacatt
ggaagtgaccatgaaagtgaagaaggggcaagaattttgaagatactagagagagctgca
gaaccagaacttctgatggcagagatgtctaaagaacagttgaatgcatttgcatcctat
caagcaaagttggaggcatcgaggcagtctgacctgcagaaatctcttgaaaaagctttg
caagctgctggacttgctgaaagagacgtcactccttttatgcgagttagagttgttgga
ttgactagcaaaagtactccatcgaagtgctgcccacaggaaggcttaattacaatttgg
aatccaactgagaaacagcaatccgagcttgcagagggtcaagcttttgctgttacaggg
cttacaccgataagctcagactcgagcaccctttatttgcaagcaaaagggtccacagcc
aaatggcggcctttgtctcctatggaaattgagggttttgagccctttttttgtcctcgc
cgatcagttccattgagtaaattgggtgaagttcctatgtccagggagtttgatatcgct
gcagtggttgtttttgtggggcagctgtatacagaagctcatcaaagtaagcagtgggta
tttgtagctgatggatccacatctacgtgtgattccaatgatgaatcagaaaccgtgatg
gccactagcttcacctcaccatgcgtagaaactgattcatttgcaccaataaactctaat
cttgtagggtctgtggtttccttttgcaatctcatcaagagagcaagagataatgttaat
aacctctgggtagctgaagcaacagaaaattcgacctattatttaaattttgatcattca
cattgttctcatctgaaagaagccagcgcttctgctgaaagatgggcaaagatttctggt
tcgagacttgaaaagcttagggggaaagttctatctataattagctgccgctga
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