Nicotiana attenuata (coyote tobacco): 109223215
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Entry
109223215 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109223215
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109223215
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109223215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
109223215
NCBI-ProteinID:
XP_019242976
UniProt:
A0A1J6IGS6
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All DBs
Position
3:complement(3760500..3764795)
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AA seq
185 aa
AA seq
DB search
MDCPPENDVCSICHGNFHVPCQSNCSHWFCANCILQVWDHGSALQACKCPLCRRPITLLV
PSDSASRLHRDPEVPEVLRRVEHYNRHFGQHSSSLFQRMQDLPFLLRRLLRDMTDPQRSL
PFVIRARVYLAVVLSGIYVLSPVDIIPEGVLGIIGLLDDLIIMFICFLHVAALYRSVLLF
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggattgtccaccagagaatgatgtttgttcaatttgccatggcaatttccatgtccct
tgtcaatccaattgttcccattggttttgtgctaactgcattctacaagtttgggatcat
ggatctgcccttcaagcatgtaagtgtccattatgtcgccgtccgattaccttgttggtt
cctagtgattctgcatcaaggttgcaccgagatcctgaagttcctgaggttttacgaaga
gttgaacactataaccgacattttggccaacatagcagcagccttttccagagaatgcaa
gatcttccctttctcctcaggagattgctccgagatatgacagatcctcaaagatctctt
ccatttgtcatcagggcacgtgtctatttggcagttgttttaagtggaatatacgtcctt
agccccgtggacattatcccagaaggggttctaggtataataggtttactagatgatctg
attatcatgttcatctgtttcctgcatgttgctgctctgtatagatcagtacttctgttt
cgccatggcggttcttaa
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