KEGG   Nicotiana attenuata (coyote tobacco): 109223229
Entry
109223229         CDS       T05870                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
nau  Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:nau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nau03041]
    109223229
Spliceosome [BR:nau03041]
 Complex B
  Other components
   Complex B specific factors
    109223229
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd WD40_RFWD3 DUF7165 Beta-prop_HPS5 Beta-prop_WDR19_1st VPS8_N Beta-prop_IP5PC_F Beta-prop_NOL10_N Beta-prop_LRRK2 Mala_s_1-like Beta-prop_IFT122_2nd zf_topless Nucleoporin_N
Other DBs
NCBI-GeneID: 109223229
NCBI-ProteinID: XP_019242993
UniProt: A0A1J6IJ16
LinkDB
Position
3:complement(5021535..5032910)
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQSFQVLQNECQVSLNTVDSLETFVADINSGRWDA
VLPQVAQLKLPRHILEDLYEQIVLEMIELREMDTARAILRQTNVMGVIKQEQPERYLRLE
HLLVRTYFDPHEAYADSTKEKRRAQIAQALSQEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAIKQDEEDMYPTTLGHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSIVFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTS
DGSRVITASSDGSVKVWDSKTTECLQTFRPPPPLRGGDASVNSVHLFPKNTDHIIVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFLAACLSPKGEWIYSVGEDRNVYCFGFQSGKLEHL
MKVHEKEVIGITHHPHINLVATYGEDCTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcttctacccttgaaatcgaagctcgagatgtaattaagatagttcttcaattttgc
aaggagaattcattgcatcaaagttttcaggttttacaaaatgagtgccaagtttcactg
aatacagtggacagtcttgaaacatttgttgctgatattaatagtggaagatgggatgca
gtgttacctcaagttgcacaacttaagcttcctagacatatacttgaggatttgtatgag
cagatagttttggaaatgattgaacttcgggagatggatactgcacgggctattttaaga
caaacaaacgtgatgggtgtcattaaacaggagcaaccagaaagatatctgaggcttgaa
catctgctagtccggacttactttgatccacatgaggcttatgcagattcaaccaaagaa
aagaggcgtgcacaaattgcacaagcactctctcaagaggtttctgttgttccaccttca
cgacttatggctttgatcggtcaggccctgaagtggcagcagcatcaaggtctacttcca
cctggtactcaatttgacttattccgaggaacagctgccataaaacaagatgaagaagat
atgtatccaacaactcttgggcacactattaagttcgggaagaaaagtcacccagagtgt
gctaggttctcaccagacgggcaattcctcgtctcatgttcagttgatggatttattgag
gtttgggaccacataagtggaaaactgaagaaggatctccagtaccaggctgatgaaacc
tttatgatgcatgatgatgctgtcctttgtgttgatttcagcagagactcggaaatgctt
gcatctgggtctcaagatggaaaaataaaggtttggcgcataaggacgggtcagtgcttg
cgccgtcttgaacgtgcacactctcagggtgtcaccagtatagtcttctctcgagatgga
actcagatcttaagcacatcatttgacagcacagcaagaattcacggtctgaagtcagga
aagttgttaaaagaatttcgcggccactcgtcttacgttaatgacgctatctttactagt
gatggatctcgagtcattaccgcatctagtgatggctcagtgaaggtctgggattcgaaa
acaaccgagtgtctacaaacatttaggccaccacctccattaaggggcggtgatgcatct
gtgaactctgtccatcttttccctaagaatactgaccacattattgtgtgtaacaagaca
tcatctatttatctcatgacacttcaaggacaggttgttaaaagtttctcatctggtaaa
agagaaggtggagattttcttgctgcttgtctatcaccaaaaggtgaatggatttactct
gtaggcgaagacagaaatgtgtactgctttggttttcaatcaggcaaactggagcatctg
atgaaggtacatgaaaaggaagttattggtattacacatcatcctcatataaaccttgtt
gccacatatggagaagactgcaccatgaaactgtggaagccttag

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