Nicotiana attenuata (coyote tobacco): 109223276
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Entry
109223276 CDS
T05870
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109223276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109223276
03036 Chromosome and associated proteins [BR:
nau03036
]
109223276
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
109223276
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
109223276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
RMC1_N
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_VPS8
WDR54
Motif
Other DBs
NCBI-GeneID:
109223276
NCBI-ProteinID:
XP_019243069
UniProt:
A0A1J6J390
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All DBs
Position
3:complement(8508885..8511446)
Genome browser
AA seq
454 aa
AA seq
DB search
MDTGYLSSASASKTRSRCPLQEQLLHRRNSSQNLDRFIPNRSAMDMDYAHYMLTEAKKGK
ENPAVDSPSREAYRKQLAETFNMNRSRILAFKNKPPTPVEAFPNEFSSSVQQAKPAKPRR
HIPQTSERTLDAPDLVDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGATSELFTADEDN
GPVTSVKWAPDGRHIAVGLNNSDVQLWDTTANRLLRTLRGGHRSRVGALDWNNHILTTGG
MDGQIINNDVRVRSPIVDTYQGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNS
TTQWLHRLEDHTAAVKALAWCPFQGNLLASGGGGGDRSIKFWNTHTGACVNSIDTGSQVC
ALLWNKNERELLSSHGFTKNQLTLWKYPSMVRVAELTGHTSRVLFMAQSPDGCTVASAAG
DETLRFWNVFGTPEVAKPAPKANPEPFAHLNRIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatacaggatatttgagttctgcatcagcaagtaagaccagatctcgttgccctctt
caggaacaacttcttcacaggagaaattcttctcaaaatttggataggttcattccgaat
cgatcagcgatggatatggactatgcacattacatgttgacagaggcaaagaaaggtaag
gaaaatccagctgttgactctccctccagagaggcatataggaagcagcttgcagaaaca
ttcaacatgaacagatctcgtatactggcattcaagaacaagccacccactcctgttgag
gcctttcccaatgaattctcatcatctgttcaacaggccaagcctgctaaaccccgtcga
cacattcctcagacttctgaaaggacactagatgctccggatctagtcgatgactactat
ttgaatttattagattggggcagcagtaatgttctttctattgctctaggcagcactgta
tatctgtgggatgcatctgatggtgccacttcagagctgttcactgctgatgaagacaat
ggtcctgttacaagtgtaaaatgggctcctgatggtagacatattgctgttggtctgaac
aattctgatgttcagctctgggatacaacagcaaatcgactgctgagaactttgagaggt
ggtcaccgatcccgagttggcgctctagattggaacaatcacattttgacaacaggggga
atggacggtcagatcataaacaacgatgtgagagtgagatccccaattgttgacacttac
caaggacatcatcaagaagtttgtggtttaaaatggtcagcctctggacaacaattagca
agcggtggaaatgataaccttcttcatatatgggacagatcaatggcttcttccaactct
acaacacagtggcttcacagacttgaagatcatacagctgctgttaaggcccttgcttgg
tgtcctttccagggtaatttattagcctctggtggtggtggaggtgaccggtccattaag
ttctggaacactcatactggtgcttgtgtgaactctattgatacgggatctcaggtttgt
gccctgctatggaacaagaatgaacgcgagctcctaagttctcatggtttcactaagaat
cagctcactctttggaaatatccttccatggttagggtagctgagcttactggtcacaca
tccagagtacttttcatggcacaaagtccagatggttgcacagtggcatctgcagctggg
gatgaaactcttagattctggaatgtatttggaactcctgaagttgcaaagcctgcacca
aaagccaaccctgagccatttgctcacttgaaccgtattcgatga
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